Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0251 ATGATTGTTGCTATGGACTTGAATGCCTCACCGGTGCCTGAGGAAGATGATGATATTTTTGAGAGACATATAGAAGAGTATATCCAACCAGAAGAACGCATAGAAACTGCAGTTGATATAGCACGTCGTGAGCGTGAAGAAAGGAAAAGACGGCTGAAAAGAGAACGGACAGACGATAGACCTGCCCATGTATCACAGTCGACAACTGGTTATGATCAGACCTTTCATGCAAAGTTTCTCAAGTCATATGATAAAAGTAGGCTTCCTCCAGGCTGGTTGGATTGCCCTTCATTTGGTCAGGAAATATACTGCTTAATACCTTCCAAGGTTCCACTTGGTGAATCATTCAATGACTGTATTGCTCCTGGTCGAAGATACTCATTTAAACAAGTTATACATCAACAACGAGTTCTGGGGAGAAAACTTGGTTTGGTGATTGATCTGACAAATACTACTCGTTACTATCCAGTTTTAGATCTGAAGAAAGAGGGTATCAAGCATATTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATTTGTCTGTGAATCAATTTGTCCATGAGGTTACTCAATTTCTATCACGTCAAAAACAAGCAAAGAAGTATATACTTGTCCATTGTACACATGGACATAATCGTACTGGATACATGATTGTCCATTATCTTATGCGCACTATGTCTATGTCGGTCACCCAGGCAATTAAATTATTTTCTGAAGCACGCCCCCCAGGAATTTATAAACCTGATTATATTGATGCTTTGTACACATTTTATCATGAAAAAAAACCTGAAATGGTAGTTTGTCCTCCTACACCAGAGTGGAAGAGATCCTCTGAATTTGATCTCAATGGTGAAGCAATGCCAGATGATGATGATGATGGAGTGCCATGCCCTCCTCAGGAGAACCATGAGACAGATGCAGTGATGACAAACGATGATGTTTTGGGAGATGAAATACCTCTTGATCAACAAGATGGATTTCGACAGTTCTGTTATCAATCTCTTAAATTGAATTTTGGGGCCAGAGGACACTCACATTTTCCAGGTTCCCATCCAGTTTCTCTTAATAGGGAAAATTTACAATTACTACGACAGCGTTATTATTATGCAACTTGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGTTACTTGATTGATAGAAGTTTCAATTTTCGAAGGGTGCAAATGAGGTTTCCTTGCAGAGGCTCAAATGATGGTTTGGCTGAGAAGACCCACCACTACACATTACTTGATGGGGAGATGATCATTGATACATTGCCTGATTCACAGAAACAGGAGAGGAGATACCTCATATATGATATGATAGCAATTAATCACGTATCAGTAATAGAGTCTGATTCTATCAACCGTACCCAAGCAAAGAAGCCTTTAGACATCTATTATTGTAGAGAGGAATATGTGGTTGCACAAATTAGCAATCACTGGTATACCACACATCTCACATTTTTGTCCAAGCGACCGTTCTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGAAATCAGGAACGGCATAATACGTACCAGAGCAGAAATCCTTATTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACCGTGACAAAGCTTTTAAATGAATTCATTAAGAAACTCTCCCATGATGCAGATGGCCTCATATTTCAGATTGACGATGATCACCAATCACTTTTCCTTCATGAACGAGGAAAGAAGAAACTCATGGAAGGGAATAGGGTTGCATTCAGAGATGGTTCAGATCCCTTGCTTCATTCGGGGAAGATCATAGAGTGTTCTTGGGATTTGAATGAACAGGAATGGGTATACATGCGAACCAGGACGGATAAATCAACTCCAAATGATTTTAATACTTACAAGAAGGTTATGCGGAGTATAAAAGACAACATCACGGAGGATGTCTTGTTGAATGAAATTTACGAGATAATTCGCCTTCCAATGTATGCCGACAGGATAAAAAATGAGAGCAAAGCCCACCAGCATGTTGGTGTAGCACGCCGAAGGTGA 2079 0.3987 MIVAMDLNASPVPEEDDDIFERHIEEYIQPEERIETAVDIARREREERKRRLKRERTDDRPAHVSQSTTGYDQTFHAKFLKSYDKSRLPPGWLDCPSFGQEIYCLIPSKVPLGESFNDCIAPGRRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVLDLKKEGIKHIKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKQAKKYILVHCTHGHNRTGYMIVHYLMRTMSMSVTQAIKLFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAMPDDDDDGVPCPPQENHETDAVMTNDDVLGDEIPLDQQDGFRQFCYQSLKLNFGARGHSHFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDTLPDSQKQERRYLIYDMIAINHVSVIESDSINRTQAKKPLDIYYCREEYVVAQISNHWYTTHLTFLSKRPFYERWKMLEKEVIEPRNQERHNTYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLNEFIKKLSHDADGLIFQIDDDHQSLFLHERGKKKLMEGNRVAFRDGSDPLLHSGKIIECSWDLNEQEWVYMRTRTDKSTPNDFNTYKKVMRSIKDNITEDVLLNEIYEIIRLPMYADRIKNESKAHQHVGVARRR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0251 692 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 277 IPR029021 -
Prci12g0251 692 CDD RNA_5'-triphosphatase 91 257 - -
Prci12g0251 692 Gene3D Protein tyrosine phosphatase superfamily 84 296 IPR029021 -
Prci12g0251 692 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 315 468 - -
Prci12g0251 692 Gene3D - 603 669 IPR012340 -
Prci12g0251 692 Gene3D DNA ligase/mRNA capping enzyme 494 545 - -
Prci12g0251 692 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311|GO:0016791
Prci12g0251 692 MobiDBLite consensus disorder prediction 45 68 - -
Prci12g0251 692 Gene3D mRNA Capping Enzyme; domain 3 547 582 - -
Prci12g0251 692 FunFam mRNA-capping enzyme 584 677 - -
Prci12g0251 692 FunFam mRNA capping enzyme family protein 84 298 - -
Prci12g0251 692 PIRSF mRNA_capping_HCE 494 581 IPR017074 GO:0004484|GO:0006370|GO:0140818
Prci12g0251 692 PIRSF mRNA_capping_HCE 575 692 IPR017074 GO:0004484|GO:0006370|GO:0140818
Prci12g0251 692 PIRSF mRNA_capping_HCE 75 489 IPR017074 GO:0004484|GO:0006370|GO:0140818
Prci12g0251 692 SMART dsp_5 122 262 IPR020422 GO:0006470|GO:0008138
Prci12g0251 692 Pfam mRNA capping enzyme, C-terminal domain 578 660 IPR013846 -
Prci12g0251 692 Gene3D DNA ligase/mRNA capping enzyme 306 488 - -
Prci12g0251 692 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
Prci12g0251 692 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 266 IPR020422 GO:0006470|GO:0008138
Prci12g0251 692 CDD Adenylation_mRNA_capping 349 574 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci12g0251 692 PANTHER MRNA-CAPPING ENZYME 577 674 - -
Prci12g0251 692 Pfam mRNA capping enzyme, catalytic domain 353 468 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci12g0251 692 Pfam mRNA capping enzyme, catalytic domain 497 578 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci12g0251 692 Pfam Dual specificity phosphatase, catalytic domain 140 260 IPR000340 GO:0008138|GO:0016311
Prci12g0251 692 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 498 574 - -
Prci12g0251 692 SUPERFAMILY Nucleic acid-binding proteins 609 677 IPR012340 -
Prci12g0251 692 Coils Coil 38 58 - -
Prci12g0251 692 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0251 Prci-Chr12 2073872 2088435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0251 1 692 Protein tyrosine phosphatase (PTP) family AT3G09100 62.826 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0251 K13917 - gmx:100776633 1076.23