Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0241 ATGAACAGGGGAATTGAAGTTCTCTCTCCAGCCTGCTACCTCCAGAACTCTAATTGGTTGTTCCAGGAAGGCAATGGAACTAGATGGACCCCGGAGGAGAACAAGCGGTTTGAGAACGCTTTGGCTCTGTATGATACGGATACGCCAGATCGTTGGCTAAAGGTGGCGGCCATGATTCCAGGCAAGACTGTGGGAGATGTGATCAAACAGTACAGAGAACTGGAAGAAGATGTGAGTGTCATTGAAGCAGGGCTGTTCCCAATCCCTGGGTACAGTGATAGATCTTTCACATTCGGGTGTGTCAATGGCCAAGGCTTTGATGGGTTCAACCAATTTTATACTGTTGGTGGAAAAAGGGGTGCGACCACTAGACCATCTGAGCACGAAAGGAAGAAAGGAGTTCCATGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGTCTGAAGAAGTATGGCAAAGGGGACTGGAGAAACATCTCTCGCAATTTTGTGACCACGAGGACGCCTACTCAGGTTGCGAGTCATGCTCAGAAGTATTTCATCAGGCAGCTTACAGGAGGGAAAGATAAGAGGAGATCCAGTATCCATGATATCACTATGGTCAATCTCCAAGAAACCAAACCTCTTTCATCAAACAGTATCAGACCTGCTTCTTCAAATCATCCCCCGAAGGTTGTAAATCCACACCAGAATCAGATATTCATGGTTAAACAGGAATATGACATGCCAATGGATTTCAATCCCACAAACGAGAACATGTTCTTGGCACCCATGTATGGGATTTCTTCATATGGATCGAAACCACAGGAGCAGCTTATACTCAGAGGTACGCTCCATGGACGTGATTATGGACCTTACGATACCATTCTTCAGATGCAATCAATGCAGCATCAGTGA 897 0.4627 MNRGIEVLSPACYLQNSNWLFQEGNGTRWTPEENKRFENALALYDTDTPDRWLKVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLFPIPGYSDRSFTFGCVNGQGFDGFNQFYTVGGKRGATTRPSEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLQETKPLSSNSIRPASSNHPPKVVNPHQNQIFMVKQEYDMPMDFNPTNENMFLAPMYGISSYGSKPQEQLILRGTLHGRDYGPYDTILQMQSMQHQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0241 298 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Prci12g0241 298 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Prci12g0241 298 SUPERFAMILY Homeodomain-like 130 183 IPR009057 -
Prci12g0241 298 Gene3D - 134 184 - -
Prci12g0241 298 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Prci12g0241 298 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Prci12g0241 298 FunFam Transcription factor SRM1 21 88 - -
Prci12g0241 298 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 240 IPR043363 -
Prci12g0241 298 CDD SANT 135 180 IPR001005 -
Prci12g0241 298 CDD SANT 28 74 IPR001005 -
Prci12g0241 298 Gene3D - 22 88 - -
Prci12g0241 298 SMART sant 25 77 IPR001005 -
Prci12g0241 298 SMART sant 132 182 IPR001005 -
Prci12g0241 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Prci12g0241 298 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Prci12g0241 298 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Prci12g0241 298 FunFam transcription factor MYB1R1 134 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0241 Prci-Chr12 1991023 1993375 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci12g0241 Myb_DNA-binding 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0241 - - qsa:O6P43_026398 454.136