Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0237 ATGAGGAAGGTGCCACTGCCTAGGGCAATGTTGTACATGACAATGCAATGCTTGGGAGCTATATGTGGTGTTGTGATTGTGAAGGGGTTTAAAGCAGGCCAGTACGAGATGGTCGGAGGGGGTGCCAACAATCTTGGAGACGGATACTCCATACGCAGTGGCCTTGGTGCCCAAATTGTTGGAACGTTTCTGCTTGTCTATGCTGTCTTCTACGCCAATGATGCCAAACGAAAAGCTCGAGACTCTCACGTCCCTGTATTGGCACCACTGGCTATTGGGTTTGTTGTGTTCGTGGTACATTTGGCTACAATTCCTATCACAGGGACTGGGATCTACCCTGCAAGAAGTCTCGGTGTGGCAGTCCTTTACAACAAGGATCGAGTTTGGGACGACTATTGGATCTTCTGGGTGGGACCCTTTCTTGGGGCAGGTCTTGCAGCTTCATATCATAAGATTGTCAATTTGTCACAAGGGAGCACATTCTGCTCATCACCCAGCAAGGGATTTGGACCGAAGGAATCTTATATATTTAACAATTATGAAGAAGTTTATGATGTTCGCAAGGTCCCGTTGTCAGGCCTAACAGTTGAATTATCGGGTAGCTTAAGCGTCTAA 615 0.4732 MRKVPLPRAMLYMTMQCLGAICGVVIVKGFKAGQYEMVGGGANNLGDGYSIRSGLGAQIVGTFLLVYAVFYANDAKRKARDSHVPVLAPLAIGFVVFVVHLATIPITGTGIYPARSLGVAVLYNKDRVWDDYWIFWVGPFLGAGLAASYHKIVNLSQGSTFCSSPSKGFGPKESYIFNNYEEVYDVRKVPLSGLTVELSGSLSV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0237 204 PRINTS Major intrinsic protein family signature 8 27 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g0237 204 PRINTS Major intrinsic protein family signature 93 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g0237 204 PRINTS Major intrinsic protein family signature 57 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g0237 204 PRINTS Major intrinsic protein family signature 133 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g0237 204 SUPERFAMILY Aquaporin-like 2 153 IPR023271 -
Prci12g0237 204 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 155 IPR034294 -
Prci12g0237 204 Pfam Major intrinsic protein 2 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g0237 204 Gene3D Glycerol uptake facilitator protein. 1 163 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0237 Prci-Chr12 1842970 1846057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0237 2 153 Major Intrinsic Protein MIP AT1G01620 69.079 2.30e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0237 K09872 - cave:132186858 239.58