Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0204 ATGGGAACAGGAAGCTTTATATGGAGTTTTACAAAGAAATTTATCACTTTTGGGCTCATTACTGTCACAGTAACTGATCGTTATGTGACCATTGTCCCAGTTCGTGGTGGCTCTATGTCTCCCACTTTTAATCCTAAAACCAGCTCTTTGATGGGAAATATTTATGATGACTATGTCTTGGTTGAGAAATTTTGCCTTGGAAACTATAGGTTTTCCCGTGGTGATGTGGTGGTATTCCGCTCCCCCTTGAATCACAAGGAGACTCACATAAAGAGAATAGTTGCGTTACCTGGTGAGTGGTTTGGTGCACAACGTAACTATGATGTGCTAAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGAGACAATGCAGCTTCCAGCCTGGATTCAAACTCATTCGGTCCTATTCCTTTGGGTTTAGTTGGAGGAAGAGTGACCCACATTGTATGGCCTCCTCAAAGAATAGGTGCAGTAAAGAAGACCCCGCCAGAAGGATTATCTTCTTAA 507 0.43 MGTGSFIWSFTKKFITFGLITVTVTDRYVTIVPVRGGSMSPTFNPKTSSLMGNIYDDYVLVEKFCLGNYRFSRGDVVVFRSPLNHKETHIKRIVALPGEWFGAQRNYDVLKVPEGHCWVEGDNAASSLDSNSFGPIPLGLVGGRVTHIVWPPQRIGAVKKTPPEGLSS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0204 168 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 164 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Prci12g0204 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci12g0204 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci12g0204 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci12g0204 168 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Prci12g0204 168 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
Prci12g0204 168 Pfam Signal peptidase, peptidase S26 108 150 IPR019533 GO:0004252|GO:0006465
Prci12g0204 168 Pfam Signal peptidase, peptidase S26 10 99 IPR019533 GO:0004252|GO:0006465
Prci12g0204 168 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Prci12g0204 168 Gene3D Umud Fragment, subunit A 25 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0204 Prci-Chr12 1553270 1557407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0204 39 162 MADS-box Gene Family AT1G29960 38.462 3.38e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0204 K09648 - gmx:100527429 289.656