Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0203 ATGGCGGCTTCCGCTTCCGCTGCATCTTCCTTCATTGGCACGCGCCTCCCCGACGTGCACTCGACTTCGGGTCGGTTCGTGGCTCGGTTTGGTATTGGTACCAAGAAACCGCCTAAGAAAGCAACGAAGCCTAGCAACGATAGGCCACTGTGGTACCCAGGAGCGAAGGCGCCGGAATGGTTGGACGGAAGTCTCGTCGGAGATTACGGCTTCGACCCATTCGGTCTGGGAAAACCCGCGGAGTATTTGCAGTTTGAGCTGGACTCGCTGGACCAGAACCTTGCGAAGAATTTGGCAGGTGATGTGATCGGCACTAGAACTGAGACTTCCGATGTCAAATCGACGCCGTTCCAGCCTTACAGTGAGGTTTTCGGCTTGCAGAGATTCCGCGAGTGCGAGCTCATCCATGGACGGTGGGCCATGCTTGCCACCCTCGGTGCCCTTGCCGTTGAATGGCTCACCGGCGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTTGTTGAGGGTTCATCCTACCTTGGGCAACCTCTTCCTTTCTCATTGACCACATTGATCTGGATTGAGGTTCTGGTGATTGGGTACATTGAGTTCCAAAGGAACGCAGAGCTGGACCCCGAGAAGAGGCTGTACCCCGGCGGCAAGTTCTTCGACCCGCTGGGCTTAGCCGCCGACCCGGAGAAGAAGGCCACCCTGCAACTTGCAGAGATCAAGCATGCTCGTCTTGCCATGGTCGCCTTCCTTGGCTTTGCTGTTCAAGCTGCTGTCACTGGCAAAGGCCCTCTCAACAACTGGGCAACCCATTTGAGTGATCCTCTTCACACTACCATCATCGACACTTTCACTTCCTCATAA 852 0.5575 MAASASAASSFIGTRLPDVHSTSGRFVARFGIGTKKPPKKATKPSNDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDVIGTRTETSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFTSS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0203 283 Gene3D Chlorophyll a/b binding protein domain 51 283 - -
Prci12g0203 283 SUPERFAMILY Chlorophyll a-b binding protein 41 282 - -
Prci12g0203 283 Pfam Chlorophyll A-B binding protein 57 253 IPR022796 -
Prci12g0203 283 FunFam Chlorophyll a-b binding protein, chloroplastic 97 282 - -
Prci12g0203 283 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 281 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0203 Prci-Chr12 1547399 1549119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0203 12 283 Chloroplast and Mitochondria Gene Families AT3G08940 86.131 4.97e-175 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0203 K08915 - qsu:112006359 517.694