Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0199 ATGGGACTGGAGCACTTGAGTCTGAGCGATACAAAGGGCAAGATCATTACTTGCAGAGCTGCGGTGGCTCATGGAGCCGGAGAGCCGTTGGTAATAGAAGAGGTCAAAGTTGATCCTCCCCAGAAAATGGAGGTCCGAATCAAGATCCTCTTCACTTCCATCTGCCATACAGATCTCAGTGCCTGGCTTGGCGAGAATGAAGCTCAAAGGGCTTACCCTAGGATTCTTGGCCACGAAGCGTGCGGGATAGTGGAGAGCGTAGGGGAAGGAGTAAAGAATGTGATGGAGGGAGATTATGTGATTCCCATATTCAACGGCGAGTGTGGGGACTGCAACTTGTGCAAGTGTGACCGTACCAACATGTGTCACAACTTCGGAGTCAACCCCATGAAGAAGCACATGGTGGCCGACGGCGCCACCCGCTTCACCGCCGCCGACACCGGCAACCCCATCTTCCACTTCCTCAACACCTCCACCTTCACCGAGTACACCGTCGTCGACTCCGCTTGCGTCGTCAAGCTCACCGGCGTTGATCACCACAGCCTCAAAAATCTCACCTTACTAAGTTGCGGCGTGTCCACAGGGGTAGGAGCAGCATGGAACACTGCCAATGTGCAATCGGCATCCAATGTTGCTGTCTTCGGTTTGGGAGCTGTGGGCCTTGCTGTGGCAGAAGGTGCTCGAGCAAGAGGGGCATCCAAGATAATCGGCATAGACATCAACCCCGACAAATTCACCAAAGCCCGGGACATGGGAGTGACGGATTTCATAAATCCAAGGGATGAAGAGAAGCCTGTCTTCGAGAGGATAAGAGAAATGACCGGAGGAGGAGTAGACTATAGCTTTGAATGTGTAGGAAACTCTGATGTCCTCCGAAATGCCTTCTTGTCTGTTCATGAGGGATGGGGATTGACAGTAATACTTGGAATTCATGCAACCCCACAAATGCTTCCAATTCATCCAATGGAGCTGTTTGATGGTCGCAGAATTGTTGCTTCGGTCTTTGGAGGCTTCAAAGGAAGGACCCACCTCCCACTTTTTGCCAAACAATGCTTGCAAGGAGTGGTGAAGCTGGACGGGTTCATCACTCACGAGCTTCCCTTTGATGACATTAACAAAGCCTTTGATCTTTTGGTCTCTGGAAAGTCACTGAGATGTCTCCTACACCTGTGA 1173 0.5132 MGLEHLSLSDTKGKIITCRAAVAHGAGEPLVIEEVKVDPPQKMEVRIKILFTSICHTDLSAWLGENEAQRAYPRILGHEACGIVESVGEGVKNVMEGDYVIPIFNGECGDCNLCKCDRTNMCHNFGVNPMKKHMVADGATRFTAADTGNPIFHFLNTSTFTEYTVVDSACVVKLTGVDHHSLKNLTLLSCGVSTGVGAAWNTANVQSASNVAVFGLGAVGLAVAEGARARGASKIIGIDINPDKFTKARDMGVTDFINPRDEEKPVFERIREMTGGGVDYSFECVGNSDVLRNAFLSVHEGWGLTVILGIHATPQMLPIHPMELFDGRRIVASVFGGFKGRTHLPLFAKQCLQGVVKLDGFITHELPFDDINKAFDLLVSGKSLRCLLHL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0199 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 185 354 IPR036291 -
Prci12g0199 390 PANTHER ALCOHOL DEHYDROGENASE 13 387 - -
Prci12g0199 390 SUPERFAMILY GroES-like 339 389 IPR011032 -
Prci12g0199 390 FunFam S-(hydroxymethyl)glutathione dehydrogenase 195 333 - -
Prci12g0199 390 Gene3D - 195 333 - -
Prci12g0199 390 SUPERFAMILY GroES-like 11 196 IPR011032 -
Prci12g0199 390 Pfam Alcohol dehydrogenase GroES-like domain 44 172 IPR013154 -
Prci12g0199 390 Gene3D - 21 385 - -
Prci12g0199 390 Pfam Zinc-binding dehydrogenase 218 337 IPR013149 -
Prci12g0199 390 FunFam Alcohol dehydrogenase 6 21 211 - -
Prci12g0199 390 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0199 Prci-Chr12 1501463 1507238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0199 44 379 Monolignol Biosynthesis Gene Families AT2G21890 28.863 3.44e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0199 K00001 - gmx:100815166 593.193