Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0187 ATGGCGTCTCACCAAGAAGCAATCAGGCTCATGGAGAACGGAAACTTCAAGGGATTATCGGCCGGAAAGGAGATCATGAGGCATGGCCGTTCCGCTCGCAAAATGTCCTCTTCCTCCTTGCGCAAGAAATCTGACCCCAGGCTTGTCTCCAAAGTTCGCTGCGCCTTGCTCCGAAATTTGCTGGCCAATCTGCAAGAGGTCATTCTGGGGACTAAGCTTTCCGTCCTTTTCCCTGCGATTCCTCTCGCCATTGCTGCTGATTGCTATGGATTCTCACAACCCTGGGTTTTTGCGTTGAGCTTGCTAGGACTTACACCCCTTGCTGAACGAATCAGCTTCCTGACTGAGCAAGTTGCTTATTACACAGGCCCCACAGTGGGAGGGCTTCTGAATGCGACATGCGGAAATGCGACAGAGCTGATAATAGCAATATTTGCTCTCAACAACAACAAAATAGCTGTGGTCAAGTATTCTCTCTTAGGTTCCATCCTTTCAAACCTTCTCTTAGTCCTTGGAACCTCTCTTTTCTGTGGTGGCATAGCAAACCTTTCACAGCCACAAAAATATGACAGAAGACAAGCAGACGTGAACTCACTCATGCTTCTGCTGGCATTATTGTGCCACTTGCTGCCAATGTTATTCAGATATGCTACTTCCTCAACTGCTCTCGCTTCAGACCCATCTCTCCAATTATCAAGAGCTGCAAGTATTGTCATGCTGGTTGCATATTTTGCTTACCTTATATTTCAACTCTGGACACATCGCCAATTATTCGAAGCCCCGGATGAGGACCAAGATAGCGACAATGTTTCAGAAGAAGCGGCAGTGATAGGATTCTGGAGTGGGTTTGCCTGGCTGGTAGGGATGACTGTGATCATAGCATTGTTGTCTGAGTATGTGGTAAAGACGATAGAGGATGCGTCAGACTCGTGGGGTCTGTCTGTCAGCTTCCTCAGCATAATTTTACTACCAATAGTGGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAAGCTGGACATCTCTTTGGGTGTTGCTTTGGGCTCTGCAACTCAAATTAGCTTGTTTGTGGTTCCCTTTTGTGTGATTGTTTCTTGGATAATGGGCAACAAAATGGATCTTAACTTCAACGTCATTGAAACGGGTTCACTTGCTTTGGCCATTATAGCAACTGCCTTCACTTTACAGGATGGAACGTCCCATTACATGAAAGGTTTTATTCTCCTGCTCTGCTACGTTGTCATTGGGACATGCTTTTTTCTGCAGAGATCACCATTCAACCAAGCTCATCTTGGAAACATGGTACCTAAATCAACAACCGATGCAGTTTTCACAGCTTAA 1356 0.4594 MASHQEAIRLMENGNFKGLSAGKEIMRHGRSARKMSSSSLRKKSDPRLVSKVRCALLRNLLANLQEVILGTKLSVLFPAIPLAIAADCYGFSQPWVFALSLLGLTPLAERISFLTEQVAYYTGPTVGGLLNATCGNATELIIAIFALNNNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANLSQPQKYDRRQADVNSLMLLLALLCHLLPMLFRYATSSTALASDPSLQLSRAASIVMLVAYFAYLIFQLWTHRQLFEAPDEDQDSDNVSEEAAVIGFWSGFAWLVGMTVIIALLSEYVVKTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPFCVIVSWIMGNKMDLNFNVIETGSLALAIIATAFTLQDGTSHYMKGFILLLCYVVIGTCFFLQRSPFNQAHLGNMVPKSTTDAVFTA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0187 451 NCBIfam calcium/proton exchanger 78 425 IPR004798 GO:0006816|GO:0015369
Prci12g0187 451 Pfam Sodium/calcium exchanger protein 282 420 IPR004837 GO:0016020|GO:0055085
Prci12g0187 451 Pfam Sodium/calcium exchanger protein 94 252 IPR004837 GO:0016020|GO:0055085
Prci12g0187 451 NCBIfam calcium/proton exchanger 59 425 - -
Prci12g0187 451 Gene3D - 273 424 IPR044880 -
Prci12g0187 451 Gene3D - 124 272 IPR044880 -
Prci12g0187 451 FunFam Vacuolar cation/proton exchanger 124 268 - -
Prci12g0187 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 27 430 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci12g0187 451 FunFam Vacuolar cation/proton exchanger 270 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0187 Prci-Chr12 1458068 1463912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0187 6 430 Antiporters AT2G38170 69.767 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0187 K07300 - zju:107405517 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2399 13 38435839 38440646 Prci12g0187 12 1458068 1463912 CCT