Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0180 ATGGGGGTCGACTACTACAAGATCCTTCGGGTGGATCGAAGCGCCAACGGTGATGATCTCAAGAAGGCCTATCGAAAGCTTGTCATGAAGTGGCACCCTGATAAAAAGCTCAACAACAAGAAAGAGGCTAGTGATAAGTTCAAGCAAATCTTCGAGGCCTACAATGTTTTGACTGATCCACAAAAGCGAGGAGCGTATGATCAGTATGGTGAGGAGGGGTTGAAGGGACAGGCACCGCCACCCGGCACTGGCGGGTTTTCCGGCGGACCAACGACGTTTCCTGTCAACCCGAGAAGTCCGGATGATATAATTTCGGAGTTATTTCGGTTTATGGACGAAACGGATGGGCGTGCTGGCGGGTCCACTTTTCGCCGGGGCGTGTTTGGCGATGAATTTTTTTCTTCATTCATGAGTGGAGGTGGAGATGGCTCCGCAAATATACCAAGGAAAGGTGCAGCTATAGTGCGAACACTGCTATGTAGTTTGAAGGACTTGTATAAAGGAACTAGAAAGAAAATGAAGATTTCGAGAGATGTTGTAGATGCCAATGGGCAGCCGATCCCAGTACAGGAAATTCTTCCAATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGAGAAGGGAAATGAACAAAGAGGACTTATGCCTGCAGACCTTATCTTCATCATTGATGAGAAACCTCATAGTGTCTTCAGGAGGGACAACAACGATCTTATCTCCACCCAGGGGATATCTCTCGTTGAAGCCCTGACAGGTTATGTGGCACAGCTGACAACCCTTGATGGTCGGAATCTTACCATTCCCATCAACTCAATCATGAGCCCCTCATATGAAGAAGTTGTGGAAGGAGAGGGCATGCCTATTCCCAAAGATCCCTCCAAAAAGGGTAACTTGAGAATCAAGTTCAATATCAAGTTCCCTTCCAGAATGTCATCCAAGCAGAAAATTGGCTTTAGAAATTATTGA 981 0.4628 MGVDYYKILRVDRSANGDDLKKAYRKLVMKWHPDKKLNNKKEASDKFKQIFEAYNVLTDPQKRGAYDQYGEEGLKGQAPPPGTGGFSGGPTTFPVNPRSPDDIISELFRFMDETDGRAGGSTFRRGVFGDEFFSSFMSGGGDGSANIPRKGAAIVRTLLCSLKDLYKGTRKKMKISRDVVDANGQPIPVQEILPIEIKPGWKKGTKITFPEKGNEQRGLMPADLIFIIDEKPHSVFRRDNNDLISTQGISLVEALTGYVAQLTTLDGRNLTIPINSIMSPSYEEVVEGEGMPIPKDPSKKGNLRIKFNIKFPSRMSSKQKIGFRNY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0180 326 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 323 - -
Prci12g0180 326 FunFam DnaJ subfamily B member 13 233 313 - -
Prci12g0180 326 Pfam DnaJ domain 4 67 IPR001623 -
Prci12g0180 326 Gene3D - 152 231 - -
Prci12g0180 326 CDD DnaJ 4 59 IPR001623 -
Prci12g0180 326 Gene3D - 233 313 - -
Prci12g0180 326 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Prci12g0180 326 FunFam Dnaj homolog subfamily b member 150 231 - -
Prci12g0180 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 235 320 IPR008971 GO:0006457|GO:0051082
Prci12g0180 326 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Prci12g0180 326 PRINTS DnaJ domain signature 24 39 IPR001623 -
Prci12g0180 326 PRINTS DnaJ domain signature 6 24 IPR001623 -
Prci12g0180 326 PRINTS DnaJ domain signature 62 81 IPR001623 -
Prci12g0180 326 PRINTS DnaJ domain signature 42 62 IPR001623 -
Prci12g0180 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 147 244 IPR008971 GO:0006457|GO:0051082
Prci12g0180 326 Gene3D DnaJ domain 3 145 IPR036869 -
Prci12g0180 326 SUPERFAMILY Chaperone J-domain 3 89 IPR036869 -
Prci12g0180 326 CDD DnaJ_C 154 315 - -
Prci12g0180 326 Pfam DnaJ C terminal domain 157 312 IPR002939 -
Prci12g0180 326 SMART dnaj_3 3 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0180 Prci-Chr12 1388928 1393846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0180 5 69 C2H2 Transcription Factor Family AT1G74250 31.884 6.45e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0180 K09510 - nnu:104602593 470.314