Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0173 ATGGAGGGGCATCATCTCCATCATCATCACCATCATCCTCTTCATCTTCATCGTCAATCACAACAGCAGCAACAGCAACATCAGCAGCAGCAACATGGTATTGTGGGTGGTGGTGGTGTTACGGTTAACGTTGATGTCGGAGACAGGTTTCCTCAATGGAGTATTCAGGAAACGAAGGAGTTCTTGATGATCAGGGCAGAGCTGGATCAGGCTTTTATGGAGACGAAGAGGAACAAGCAGTTATGGGAAGTTATCTCCAACAGGATGAAGGAAAAGGGTTACTTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCAGGTACAAGGCGTGTGAAACAATGGAGCCAGAAGCTCTGAGGCAGCACTTCCCGTTTTACAACGAGCTTCAGTTGATTTTCGCGAGTAGGATGCAGAGAATGCTGTGGGCAGAAGCTGAAGGAGGCGGGTCGAAGAAGAAGGCGCTACAAAATCTCTCATCAGAAGAAGAAGACGAAGAAGAAGATGATAACAACAAAGAAGTCAGTGAAGGAGATCAAAAAGGTACGAGTAGCAGCAGGAAGAAGAAGATGAAGAAGAAGGGTTTAAAGGGTAGCAATATCAGTAGCGTAAGTGATAGTCTGAGGAACATGAAGGAGATATTGCAGGGGTTTATGAAGCAGCAAATGCAAATGGAGGCACAGTGGATGGAAGCTTATGAAGCGAGAGAGAAGGAGAGGAGGATGAAGGAGCTTGAATGGAGGCAAACAATGGAGGCATTGGAGAATGAGAAGATAAAGATGGACCAGAGATGGCGAGAGAGAGAAGAACAACGAAGGCTTGTAGAAGAAGCTAGGGCTGACAAAAGAGATGCTCTCGTCACGGCTCTTCTAAACAAGCTCTCAAGAGATCACGACCTGTAG 912 0.4671 MEGHHLHHHHHHPLHLHRQSQQQQQQHQQQQHGIVGGGGVTVNVDVGDRFPQWSIQETKEFLMIRAELDQAFMETKRNKQLWEVISNRMKEKGYFRSPEQCKCKWKNLVTRYKACETMEPEALRQHFPFYNELQLIFASRMQRMLWAEAEGGGSKKKALQNLSSEEEDEEEDDNNKEVSEGDQKGTSSSRKKKMKKKGLKGSNISSVSDSLRNMKEILQGFMKQQMQMEAQWMEAYEAREKERRMKELEWRQTMEALENEKIKMDQRWREREEQRRLVEEARADKRDALVTALLNKLSRDHDL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0173 303 Coils Coil 254 274 - -
Prci12g0173 303 Pfam Myb/SANT-like DNA-binding domain 52 134 IPR044822 -
Prci12g0173 303 CDD GT1 51 113 - -
Prci12g0173 303 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Prci12g0173 303 MobiDBLite consensus disorder prediction 1 17 - -
Prci12g0173 303 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Prci12g0173 303 MobiDBLite consensus disorder prediction 1 38 - -
Prci12g0173 303 MobiDBLite consensus disorder prediction 18 36 - -
Prci12g0173 303 MobiDBLite consensus disorder prediction 155 206 - -
Prci12g0173 303 Gene3D - 53 114 - -
Prci12g0173 303 PANTHER FI21293P1 18 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0173 Prci-Chr12 1288727 1290478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0173 15 303 Trihelix Transcription Factor Family AT2G38250 53.287 3.90e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci12g0173 Myb_DNA-bind_4 2.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0173 - - gmx:100794230 345.895