Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0127 ATGGACGTCGATGAAACTTCTAAACCCAAAGAGGAAAAGCTCTTATTGGTCATGTTAGTGGGGGCACCAGGGAGCGGCAAGTCCACTTTCTGCGAAGAAGTTATGCGTTCTTCTACTCGTCCTTGGGTTCGCGTCTGCCAGGATATCATTGGAAATGGAAAAGCAGGAAACAAAGCTCAGTGTCTAAGCAGTGCAGCTGGAGCATTGAAGGATGGAAAGAATGTATTTATTGACAGATGCAACCTTGATAGAGAACAGCGTTCAGGATTCGCAGAGCTTTGTGGACCCCAAATAGATGCTCATGCCATTGTGCTTGATCTTCCAGCAAAGCTTTGTATTTCCCGATGTGTCAAACGAACTGGGCATGAAGGCAATTTGCAGGGTGGAAAAGCTGCTGCAGTAGTGAATAGGATGCTTCAAAAGAAAGAGCTGCCTACGTTAAGTGAAGGGTTTAACCGGATAACATTTTGTCAGACTGAGATTGATGTCAAAGCAGCTATCAACACGTATAGTGCACTTGGGCCACTGGATAACCTTCCACATGGATGTTTTGGCCAGAAAAGTAAAGATGCCAAAGTTCAAGTGGATATAATGAAGTTTTTCAAAAAGGCGGAGGTCCCAGTTGTTGCTGAGTCTAGAGAGAGTTGTGGTGGAAATTTTACTTCTAAAAGTAATGGGATGATAGATCCCTACCATAAAGATGTGGAAAATTTCCCATCAAATTCAGATAAAGCCAACTTAGGGTCAATGAATGTAGAAAATATCTCAGTTGGTTCCATTGTTTCTCAAGTTGATCCTACTTTCATGGGTGACGCTCCCACTTTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTTGACCATGAAAAGGCAGCTGATATTATTGTGGAGAAAGTTTTGGAGTTCTCAAATAAGCTTGTGAATGCTAGATTTGCTCTAGTTGACTTAACTCATGGTTCAAAGATTCTGTCTTTAGTTAAAGCTAAAGCTTCTAAAAAGAACTTAGATCCCAGAAAGTTTTTTACACATGTTGGGGACATTACTTGCCTTAAGTCCGCAGGGGGCTTGCACTGTGCTGTGATAGCTAATGCTGCCAACTGGCGATTGAAACCTGGAGGTGGAGGAGTTAATGCTGCAGTTTTCAAGGCTGCAGGTCCTGTCTTGGAGACTGCAACCAAAGAACGAGCACAATTGCTTTTGCCCGGGAATGCTGTTGCTGTCCCTCTACCTTCATCTTCTCCTCTGTTTGCTAGAGAGGGAGTAACCCATGTAATACATGTTCTTGGACCGAATATGAATTCACAAAGGCCAGATTGTCTCAACAATGATTACAATAAAGGCTGCAAGATTCTCAGAGAGGCTTACACTTCACTATTTGAAGCTTTTGCATCAATTGTGAAGGCTGGCACAGAGCAAAAGAGCAAGAGAGATGCTGATCATGGATCTGAAAAAAGCAAGAAATACAAGGGAAGTCAGGATGACGTTGAAGTGAACTTTACTGGTAACAAGGTCGTAAATATAGATTCAAGTAATAAAAAAATTGATGCCAGCCTGAATAAGACATGGGGATCATGGGCTCAAGCTCTTCATCTAATAGCTATGAATCCTGAAAAGCATAAGAACGAATTGCTTGAAATATCTGAAGATGTAGTTGTGCTTAATGATCTGTATCCTAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAACTAGAGGCCTCGATTGCCTGGCTGATGTTCAAAATGATCACCTTCACTTACTAAAGAAGATGCATGCTGTGGGTTTAAAGTGGGCCGAGAAGTTCTTACAAGAGAATGCTTCATTGGTTTTTCGTCTTGGATATCACTCGGCTCCGTCAATGCGACAACTACATTTACATGTTATAAGTCAGGACTTTGACTCAAAACATTTGAAGAACAAGAAGCACTGGAACTCGTTCAACACCGATTTCTTTCGTGACTCGGTAGATGTAGTTGATGAGATCTCTAATAACGGGAAAGCAACCTTGAAAGATGATGACAAGTTGCTGTCCATGGAGTTGAGGTGCCATAGATGTAGAAGTGCACACCCTAACATTCCCAGGTTAAAATCCCATATTAGCAGTTGCCAAGCTTCCTTTCCTGCTTGCTTGCTTCAAAATGGTCGTTTGGTTCGTGCGCGAGGTGAAGTTAACATCAGTTCATAA 2187 0.4216 MDVDETSKPKEEKLLLVMLVGAPGSGKSTFCEEVMRSSTRPWVRVCQDIIGNGKAGNKAQCLSSAAGALKDGKNVFIDRCNLDREQRSGFAELCGPQIDAHAIVLDLPAKLCISRCVKRTGHEGNLQGGKAAAVVNRMLQKKELPTLSEGFNRITFCQTEIDVKAAINTYSALGPLDNLPHGCFGQKSKDAKVQVDIMKFFKKAEVPVVAESRESCGGNFTSKSNGMIDPYHKDVENFPSNSDKANLGSMNVENISVGSIVSQVDPTFMGDAPTLAFPSISTSDFQFDHEKAADIIVEKVLEFSNKLVNARFALVDLTHGSKILSLVKAKASKKNLDPRKFFTHVGDITCLKSAGGLHCAVIANAANWRLKPGGGGVNAAVFKAAGPVLETATKERAQLLLPGNAVAVPLPSSSPLFAREGVTHVIHVLGPNMNSQRPDCLNNDYNKGCKILREAYTSLFEAFASIVKAGTEQKSKRDADHGSEKSKKYKGSQDDVEVNFTGNKVVNIDSSNKKIDASLNKTWGSWAQALHLIAMNPEKHKNELLEISEDVVVLNDLYPKAQKHVLVLARTRGLDCLADVQNDHLHLLKKMHAVGLKWAEKFLQENASLVFRLGYHSAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTDFFRDSVDVVDEISNNGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQASFPACLLQNGRLVRARGEVNISS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0127 728 Gene3D - 525 707 IPR036265 -
Prci12g0127 728 SUPERFAMILY Macro domain-like 274 309 IPR043472 -
Prci12g0127 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 316 467 IPR043472 -
Prci12g0127 728 FunFam Transcription factor bHLH140 4 172 - -
Prci12g0127 728 SUPERFAMILY HIT-like 523 687 IPR036265 -
Prci12g0127 728 PANTHER APRATAXIN-RELATED 275 703 - -
Prci12g0127 728 SUPERFAMILY Macro domain-like 323 461 IPR043472 -
Prci12g0127 728 Pfam Macro domain 363 444 IPR002589 -
Prci12g0127 728 ProSitePatterns HIT domain signature. 612 630 IPR019808 -
Prci12g0127 728 SMART YBR022w_8 340 479 IPR002589 -
Prci12g0127 728 FunFam aprataxin isoform X2 524 704 - -
Prci12g0127 728 Pfam Scavenger mRNA decapping enzyme C-term binding 536 643 - -
Prci12g0127 728 Pfam AAA domain 16 141 - -
Prci12g0127 728 Pfam C2HE / C2H2 / C2HC zinc-binding finger 648 701 IPR032566 -
Prci12g0127 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 161 IPR027417 -
Prci12g0127 728 FunFam Transcription factor bHLH140 321 468 - -
Prci12g0127 728 Gene3D - 2 171 IPR027417 -
Prci12g0127 728 ProSiteProfiles Macro domain profile. 328 534 IPR002589 -
Prci12g0127 728 MobiDBLite consensus disorder prediction 471 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0127 Prci-Chr12 1022914 1027413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0127 5 724 C2H2 Transcription Factor Family AT5G01310 59.946 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0127 K10863 - gmx:100786762 1073.15