Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0121 ATGGAGTACAACATCCCTCCTACCAGCAACCATACCTCATCAACAGCGTCATCTTCGAAGGCGAAAAAAAAGAGCGGGAAGAAAAGCAAGGGAGGAGTGAAGCTTTCCACTGATCCACAGAGCGTGGCGGCTCGAGAACGAAGGCATCGAATCAGCGATCGGTTCAAGATCTTGCAGAGCATGGTCCCTGGTGGGAGTAAGATGGACACAGTGTCCATGTTGGAGGAAGCGATCCATTACGTGAAATTTCTGAAAACTCAGATATGGCTCCACCAAACCATGATCAGCTCTGTTGACGATGACCTTCCACTTCCCAACCATGAACAGTTCACTTCGTTTCAACAAAACCCATCATCTTCTTCTTCCGTGGGTTCTGTGCAGAATTTGACACAGATACCACTGGAACAGTATTGCTGCTTCCAAAATGAAGCGGCAACAACAATATTGAACGCCGATATGAACTATTGGCCAGCGTAG 477 0.4759 MEYNIPPTSNHTSSTASSSKAKKKSGKKSKGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMISSVDDDLPLPNHEQFTSFQQNPSSSSSVGSVQNLTQIPLEQYCCFQNEAATTILNADMNYWPA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0121 158 SMART finulus 41 90 IPR011598 GO:0046983
Prci12g0121 158 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Prci12g0121 158 MobiDBLite consensus disorder prediction 1 20 - -
Prci12g0121 158 MobiDBLite consensus disorder prediction 1 49 - -
Prci12g0121 158 FunFam Transcription factor LAX PANICLE 38 101 - -
Prci12g0121 158 Pfam Helix-loop-helix DNA-binding domain 45 84 IPR011598 GO:0046983
Prci12g0121 158 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 96 IPR036638 GO:0046983
Prci12g0121 158 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 14 138 IPR045843 GO:0003700|GO:0006355
Prci12g0121 158 CDD bHLH_AtIND_like 36 95 - -
Prci12g0121 158 Gene3D - 40 93 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0121 Prci-Chr12 988980 989456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0121 27 99 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 52.055 3.34e-22 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci12g0121 HLH 4.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0121 - - qsa:O6P43_016570 156.762