Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0113 ATGGCTGCATCATCATCGTTAACACTTGGTTTTCTGCTCCATCTTCTTCTTCTCCTTCTTGTTTCAGCCACGGCTCAAGAAGACACCCAGTTTTCCTATGAGGGATTCGATGACAATGGGAATCTGACTCTTCAAGAAGCTGCGCAAGTTACGACTGAACGTACGCTTCAGCTCACCAACATGTCCCGCGATATTGTAGGCCGTGCTTTCCATAACAGAAGCATTCAGATGCTTCACAATTCATCAGACCAGCGACAGAAAGCTTCTTCCTTTAGCGCATACTTCGTTTTCTCCATTGTCCCCTCAACCTCTGCTCCCGGCGGCTTCGGCCTTGCTTTCGTCCTAGCACCATTCAAGGATATGTTTGAAGACGCTAGAGACGGCCACTATCTTGGTATTTATAACGATTCCAACTATGCGAATGGCATATTTGCTGTGGAATTTGATACGGTGAATGGCTCTGGAGAAGGAGAGTCAGACTCAGAAGCGAACGAAGTTGGGATCAATATTAAAGACACAACCTCATTTGTCTCTGAACGAGCTGCTTACGTTGGGAACGATTCTAAAAGGGTAAATTTCAGTTTCGAGGAAGTTGATGCTGTACAAGCTTGGATAGATTATGATGGTGACAACAAAATTGTGAATGTGACTGTAGCTCCGATGTCAGTGCCAAGACCCTCCACACCACTTTTATCAACGAAACCTGCCGATTTTAACCTTACCGCCGTTATAACCCAAGACATGTACGCCGGTTTCTCAGCATCAACAGGGGCAAGCAAAGCAAGCTCTCATTACATTCTGGGATGGAGCTTTGCAGTCAATGCCCCTGCTCGCATGCTTGACTTTTCCAAGCTTCCACGCCCACCATCAAAAGTCAAAGACCCTTCCTCTTTTCCTTGGGTAAACTTTGCCATAGGAGTTTTGTCTTCTTTAACCTTGATATTATTGCTTTCTTTGTGCTCTGTAACGTTGTACAAGAGGTACACCAATTTTGAAACTCTCGAGGATTGGGAGCTAGATTGTCCTCACAGATTCAGATACAGAGATCTCCGTACGGCAACAAAAGATTTCAAGGAGAGTGAGCTAATAGGAGTTGGAGGCTTTGGTTCTGTGTACAAAGGTGTCTTGCCTTCCACAGGAACTGAAGTTGCTGTGAAGAGGATCATGCGAGGGCCAATCCAAGGAATGAGGGAATTTGCGGCAGAAATTGAAAGCTTAGGAAGATTAAGACACAAGAATTTAGTCAATCTTCAAGGATGGTGCAAGCAAAAGAATGATCTCCTTCTAATCTATGACTATATCCCTAACGGAAGCCTTGACTCACTCCTCTTCAAGCAAAGCCTTCTCTTGAACTGGGAACAAAGGTTCAACATCATCAAAGGCGAAGCTAACGGGCTGTTATATCTTCATGAAGATTGGGAGCAGGTGGTGGTCCATAGAGATATCAAAACCAGTAATATTCTCATCGATGGAGATTTAAATGCTCGTTTGGGCGATTTTGGCCTCGCTAGGCTATATGATCATGGTGAAGCATCACACACGACCAACGTGGTGGGGACAATTGGGTATATCGCACCAGAATTGACTCGCACGGGAAAGGCATCCACAAGCTCTGATGTTTATGCTTATGGAGTTGTGCTTCTTGAAGTTGTCAGCGGGAGGAAAGCCGTTGGGCCAGGACAATTCTTTTTGGTGGATTGGGTTGTGGAGAATCACAATATGGGTCAGATTCTTGAAGTGGTTGATCCAAAGTTGGGATCAGTTTATGTTGAGGAAGAGGTGGAGTTGGTTCTGAAACTGGGTCTTCTCTGTGCTCAACATAATGCAGATTCAAGGCCCACCACGAGGCAAGTGATGAGGTACCTAATTGATGACCCTCTGCCTGATATGGGAGATTGGAGAAGACAGACAGATTCAGGTAGTGGAAGAATGAGTCTGGGTTTCTTAGAAATTGTATCTACAAGTACTTCCTCAACTTCATATAACATAACCTCTAATAGTGGCATGAATAGCAGGCCTATCCAAGCTGGTAGATAG 2037 0.4487 MAASSSLTLGFLLHLLLLLLVSATAQEDTQFSYEGFDDNGNLTLQEAAQVTTERTLQLTNMSRDIVGRAFHNRSIQMLHNSSDQRQKASSFSAYFVFSIVPSTSAPGGFGLAFVLAPFKDMFEDARDGHYLGIYNDSNYANGIFAVEFDTVNGSGEGESDSEANEVGINIKDTTSFVSERAAYVGNDSKRVNFSFEEVDAVQAWIDYDGDNKIVNVTVAPMSVPRPSTPLLSTKPADFNLTAVITQDMYAGFSASTGASKASSHYILGWSFAVNAPARMLDFSKLPRPPSKVKDPSSFPWVNFAIGVLSSLTLILLLSLCSVTLYKRYTNFETLEDWELDCPHRFRYRDLRTATKDFKESELIGVGGFGSVYKGVLPSTGTEVAVKRIMRGPIQGMREFAAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLFKQSLLLNWEQRFNIIKGEANGLLYLHEDWEQVVVHRDIKTSNILIDGDLNARLGDFGLARLYDHGEASHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVVLLEVVSGRKAVGPGQFFLVDWVVENHNMGQILEVVDPKLGSVYVEEEVELVLKLGLLCAQHNADSRPTTRQVMRYLNXDDPLPDMGDWRRQTDSGSGRMSLGFLEIVSTSTSSTSYNITSNSGMNSRPIQAGR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0113 679 SUPERFAMILY Protein kinase-like (PK-like) 341 630 IPR011009 -
Prci12g0113 679 Pfam Legume lectin domain 29 285 IPR001220 GO:0030246
Prci12g0113 679 CDD lectin_legume_LecRK_Arcelin_ConA 29 274 IPR001220 GO:0030246
Prci12g0113 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 291 IPR013320 -
Prci12g0113 679 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Prci12g0113 679 Gene3D - 26 280 - -
Prci12g0113 679 Pfam Protein kinase domain 357 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0113 679 CDD STKc_IRAK 363 623 - -
Prci12g0113 679 PANTHER - 21 626 - -
Prci12g0113 679 SMART serkin_6 357 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0113 679 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Prci12g0113 679 FunFam serine/threonine-protein kinase PBS1-like 326 433 - -
Prci12g0113 679 FunFam L-type lectin-domain containing receptor kinase S.4 434 634 - -
Prci12g0113 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Prci12g0113 679 ProSiteProfiles Protein kinase domain profile. 357 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0113 679 Gene3D Transferase(Phosphotransferase) domain 1 434 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0113 Prci-Chr12 891136 893397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0113 31 642 Receptor kinase-like Gene Family AT5G01560 48.025 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci12g0113 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0113 - - gmx:100792854 765.763