Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0112 ATGATGCATCATCAGACTCATCTTCATCCCTCCACCTGGTCAGTCTCCCATGACATGCCCTCCGTTTTTGATCCGTTCGATCTTTCCTCCATCTTCTTCTCTGACCATCATTTCCAGTACCCAGTTGAAATGGGTTCAGAAGCATCCAAATCCATAGAGAATTCCTCCCCCAATGAATTTGAAGTTGCTTCTGTCGTCTTCTCTCGAGATCATAATTTCCAGTACCCAGTTAACGGAGAAGATATTACGGGAGTCCCATCAATGGATTTGGATGCTCATGACCATGATTTGAGTGACCAATTTCTGAATATCCATGGATACCCGGAAGATAGTGAAGAGAGCTTCCTTCCTTCCCAGAATCTATCTTCTGAAGCAGAAGATTATTGGAGTTGTAGTCCATGCATGAAATCATCAGAATGTTTGCTGAACTTGCCTCAAGAAGACATGGAAATGGACACCCAGCTGATTCTTCCACATCTTTTAGAAGCCCACGGTGAAGCCAGAGATCAGAACCATGATGTTTTGGCAGAAGAAACCCTGAGATGCATAAACCAGAAAACAAGCCCACTCGCAGAAGATCCTCTGGAACGCCTAGCATTCCACTATTCCTTCCAAAACAGGACAGGAAATCCTGAGGGCCATTTTCTCAAGCAGGAGGCTTACAAAAATTTTGTTCCTGCATTCAAGGCATTTTACCAGAGCACCCCCCATGGAAGATTTGCTCATTCTGGAGCCAATTCAGCAATTCTAGAAGCCATATCAAAGGATTCAGAGGCCATACACATAATAGATTTCGACATCGGAGAAGGGGTCCAGTGGCCCCCTGTGATCGAGGCCATTTCTCAACAGAACAGAGCGCTGAAGTTAACATCAATGAAATGGGAAACAGAGCAAGAAAACTCTGAGGAGCCCAGAAGGAACCTTGTTGAATACGCAAGGTCCTGCGGTCTCAAGATGAAGATAGAAGAAAAAGGTTTCGAGGAATTGGTTTCGAAACTCAAGAAATTGAAAAAAAGAGGAGGCAACGTGAAGAGAGATTTCCTAGTCTTTAACTGCATGGTGGGTCTTCCTCACATGGGAAGAGGAAGAAGCAGAAGGTCTGTAATGGAGTTTTTAAATTTAGCCAAGAACATGATCAACAAGAACACCTGCAACAGGGGAATCATCACTTTGGGGGATGGGGAAGCTGACAACAAACTGAGAAACAGCTTGAGTTTCAGGTCATTTTTTGACGGCAACATGATTCATTACAAGGCCTTACTGGAATCAGTAGAATCAAATTTCCCAGCTTGTTTCTCACAAGCAAGAACAGCCGTAGAGTTCTTATTCGTGGGACCTTATGTGTCTTCCGCTGCTTGGATGAAGAAATGGGAAGAACTGAGAGAAAATAACCATTTTCAGGCAGAAAATGGCTTTGGGATAGAGGGTAGAAGATTGAGCCAAGAGATTTTAATGGAAGCGAGGGAAATGTTGAGAGGAAGCATGGTGGGGTCATACGAGGCAAGGATTGAAGGGCAAAATGGGAATGAAATGGTTCTCGCATGGAAAGGAACACAGCTAGTCAGAGTATCAACTTGGGGAAGTCAAGAGGCCTGA 1596 0.4424 MMHHQTHLHPSTWSVSHDMPSVFDPFDLSSIFFSDHHFQYPVEMGSEASKSIENSSPNEFEVASVVFSRDHNFQYPVNGEDITGVPSMDLDAHDHDLSDQFLNIHGYPEDSEESFLPSQNLSSEAEDYWSCSPCMKSSECLLNLPQEDMEMDTQLILPHLLEAHGEARDQNHDVLAEETLRCINQKTSPLAEDPLERLAFHYSFQNRTGNPEGHFLKQEAYKNFVPAFKAFYQSTPHGRFAHSGANSAILEAISKDSEAIHIIDFDIGEGVQWPPVIEAISQQNRALKLTSMKWETEQENSEEPRRNLVEYARSCGLKMKIEEKGFEELVSKLKKLKKRGGNVKRDFLVFNCMVGLPHMGRGRSRRSVMEFLNLAKNMINKNTCNRGIITLGDGEADNKLRNSLSFRSFFDGNMIHYKALLESVESNFPACFSQARTAVEFLFVGPYVSSAAWMKKWEELRENNHFQAENGFGIEGRRLSQEILMEAREMLRGSMVGSYEARIEGQNGNEMVLAWKGTQLVRVSTWGSQEA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0112 531 Coils Coil 319 339 - -
Prci12g0112 531 Pfam GRAS domain family 160 526 IPR005202 -
Prci12g0112 531 ProSiteProfiles GRAS family profile. 148 527 IPR005202 -
Prci12g0112 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 138 520 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0112 Prci-Chr12 870269 871864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0112 147 526 GRAS Transcription Factor Family AT5G66770 27.295 1.11e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci12g0112 GRAS 1.3e-40 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0112 - - pcin:129291421 485.337