Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0102 ATGGTCACCGACGCCTCTCCGTTGCTAACCCATGACGGCTTAGAGTTCTGCCAGTACATGGCAGCGGGGTCAATCGCTGGTTCAATCGAGCACATGGCGATGTTTCCCGTGGACACGCTCAAGACCCGAATGCAAGCCATGACCGGGTTGGACCCAGGCCATCATGGCGGAGTCCGGCGAGCCCTCGGTTCCATCCTGAAGCTGGAAGGCCCTTCGGGACTCTATCGCGGGATTGCCGCCATGGGTCTCGGAGCTGGTCCCGCACACGCCGTGTATTTCTCGGTGTACGAAATCTGCAAAGAGAAATTCTCCGGGGGAAACCGGAACAACCCCGCCGCCCACGCAGCTTCCGGAGTCTGCGCCACCATCGCGAGCGACGGCGTGATGACGCCGATGGATGTAGTGAAGCAGAGATTACAGCTGAAGAGCAGTCCGTACAAGGGTGTGTGGGATTGCGTGAAGAAGGTGTTGAAGGAAGAAGGGGCGGGTGCGTTGTACGCGTCGTACAGGACGACGGTGGTGATGAATGCGCCGTTCACAGCGGTGCATTTTGCGACATACGAGGCTGTGAAGAGGGGGCTGACGGAGTTGTCGCCGGTGAATTCAGAAGAAGATGAAAGAGTGGTGGTACACGCCACAGCGGGAGCGGTGTCAGGGGTGGCGGCTGCGGCGGTGACTACGCCACTAGATGTAGTGAAAACTCAGCTGCAATGCCAGGGGGTTTGTGGGTGTGATAAATTGTGCAGCAGTTCGATAGGGGATGTGATTGAGAGCGTGATCAAGAAGGAGGGATACAGAGGGCTCATGAGAGGCTGTCTGCCGAGGATGCTCTTTCATGCTCCCGCCGCTGCTATTTGTTGGTCCTCTTATGAAGCTTCCAAATCTTTCTTCCTCCGTTTTTGA 903 0.5714 MVTDASPLLTHDGLEFCQYMAAGSIAGSIEHMAMFPVDTLKTRMQAMTGLDPGHHGGVRRALGSILKLEGPSGLYRGIAAMGLGAGPAHAVYFSVYEICKEKFSGGNRNNPAAHAASGVCATIASDGVMTPMDVVKQRLQLKSSPYKGVWDCVKKVLKEEGAGALYASYRTTVVMNAPFTAVHFATYEAVKRGLTELSPVNSEEDERVVVHATAGAVSGVAAAAVTTPLDVVKTQLQCQGVCGCDKLCSSSIGDVIESVIKKEGYRGLMRGCLPRMLFHAPAAAICWSSYEASKSFFLRF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0102 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 102 IPR018108 -
Prci12g0102 300 Pfam Mitochondrial carrier protein 110 195 IPR018108 -
Prci12g0102 300 Pfam Mitochondrial carrier protein 206 298 IPR018108 -
Prci12g0102 300 Pfam Mitochondrial carrier protein 15 104 IPR018108 -
Prci12g0102 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Prci12g0102 300 Gene3D Mitochondrial carrier domain 112 299 IPR023395 -
Prci12g0102 300 PANTHER MITOFERRIN-1-RELATED 15 297 - -
Prci12g0102 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 296 IPR018108 -
Prci12g0102 300 SUPERFAMILY Mitochondrial carrier 13 291 IPR023395 -
Prci12g0102 300 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Prci12g0102 300 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Prci12g0102 300 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085
Prci12g0102 300 PRINTS Mitochondrial carrier protein signature 215 237 IPR002067 GO:0055085
Prci12g0102 300 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0102 Prci-Chr12 824468 826131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0102 4 300 Chloroplast and Mitochondria Gene Families AT1G07030 69.024 4.57e-146 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0102 K15113 - qsa:O6P43_026278 452.981