Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0101 ATGGTCACCGACGCCTCTCCGTTGCTAACCCATGACGGCTTAGAGTTCTGCCAGTACATGGCAGCGGGGTCAATCGCTGGTTCAATCGAGCACATGGCGATGTTTCCCGTGGACACGCTCAAGACCCGAATGCAAGCCATGACCGGGTTGGACCCAGGCCATCATGGCGGAGTCCGGCGAGCCCTCGGTTCCATCCTGAAGCTGGAAGGCCCTTCGGGACTCTATCGCGGGATTGCCGCCATGGGTCTCGGAGCTGGTCCCGCACACGCCGTGTATTTCTCGGTGTACGAAATCTGCAAAGAGAAATTCTCCGGGGGAAACCGGAACAACCCCGCCGCCCACGCAGCTTCCGGAGTCTGCGCCACCATCGCGAGCGACGGCGTGATGACGCCGATGGATGTAGTGAAGCAGAGATTACAGCTGAAGAGCAGTCCGTACAAGGGTGTGTGGGATTGCGTGAAGAAGGTGTTGAAGGAAGAAGGGGCGGGTGCGTTGTACGCGTCGTACAGGACGACGGTGGTGATGAATGCGCCGTTCACAGCGGTGCATTTTGCGACATACGAGGCTGTGAAGAGGGGGCTGACGGAGTTGTCGCCGGTGAATTCAGAAGAAGATGAAAGAGTGGTGGTACACGCCACAGCGGGAGCGGTGTCAGGGGTGGCGGCTGCGGCGGTGACTACGCCACTAGATGTAGTGAAAACTCAGCTGCAATGCCAGCAGTTCGATAGGGGATGTGATTGA 741 0.587 MVTDASPLLTHDGLEFCQYMAAGSIAGSIEHMAMFPVDTLKTRMQAMTGLDPGHHGGVRRALGSILKLEGPSGLYRGIAAMGLGAGPAHAVYFSVYEICKEKFSGGNRNNPAAHAASGVCATIASDGVMTPMDVVKQRLQLKSSPYKGVWDCVKKVLKEEGAGALYASYRTTVVMNAPFTAVHFATYEAVKRGLTELSPVNSEEDERVVVHATAGAVSGVAAAAVTTPLDVVKTQLQCQQFDRGCD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0101 246 Gene3D Mitochondrial carrier domain 6 197 IPR023395 -
Prci12g0101 246 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 102 IPR018108 -
Prci12g0101 246 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 246 IPR018108 -
Prci12g0101 246 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
Prci12g0101 246 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Prci12g0101 246 PRINTS Mitochondrial carrier protein signature 215 237 IPR002067 GO:0055085
Prci12g0101 246 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Prci12g0101 246 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085
Prci12g0101 246 Pfam Mitochondrial carrier protein 206 240 IPR018108 -
Prci12g0101 246 Pfam Mitochondrial carrier protein 110 195 IPR018108 -
Prci12g0101 246 Pfam Mitochondrial carrier protein 15 104 IPR018108 -
Prci12g0101 246 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Prci12g0101 246 SUPERFAMILY Mitochondrial carrier 13 242 IPR023395 -
Prci12g0101 246 PANTHER MITOFERRIN-1-RELATED 15 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0101 Prci-Chr12 824468 826131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0101 4 246 Chloroplast and Mitochondria Gene Families AT1G07030 67.901 8.73e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0101 K15113 - cave:132191840 353.599