Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0054 ATGGCCTCGCAAAGGTGTTTCTGCATTGTGGTCTATTCCTTGGTGTTTTTAGGTGTCGCGAACACAGCCCTGTCATCAACATCACTGTCTCCTGATTTCTACGGCCACTCTTGTCCCAAAGCTTTGGACACCATCGAAAGAGTCGTTCAGGCTGCCGTCTACAAAGAGCGTCGCATGGGCGCTTCTCTGCTGCGCTTGCACTTCCACGATTGTTTCGTTAATGGATGCGACGGATCAATTCTTCTGGATGATTCGGCAACAATAGAGAGCGAGAAGAAGTCACTGGCAAATGTGAATTCAGCGAGAGGATTCGAAGTGATCGACGAGATCAAAAGCGCAGTGGACAAAGCGTGTGGTGGCCCTGTCGTTTCTTGCGCCGACATCTTGGCCGTCGCGGCTCGAGACTCGGTCGTCGCTTTGGGGGGCCCATCATGGAAAGTGAGGCTCGGCAGAAGAGACTCCAAAACGGCGAGCCGAACTGAAGCAAACGCGGCCATCCCAGCCCCATCTTTCAGCCTGTCTCAGCTGAGGAACAGCTTCAAGAATCAAGGCCTGAGCGAGAAAGACCTTGTGGTTTTATCCGGCGGCCACAGCATTGGGTTGGCGCAGTGTGGTACATTCAAAGACCGCCTCTACAACGAATCATCTGAGATCGACCCCTCCTTTGCCAAAGACCTCAAGAGGGGGTGCCCCACAGATGGAGGGGACGCCAACCTGGCTCCGCTGGACCCCACCGCAGCTCGATTCGACGTGGCCTACTTCTCCAATTTGCTTCGCAAGAAGGGCCTTCTTCACTCTGATCAACAGCTCTTCAGTGGCGCCTCAACTGATGCATTGGTTCAGAAATACAGCTACGATACGAAAGCTTTCCGCAAGGATTTTGCCAATTCCATGATTAAGATGGGAAATATAAAGCCCCTCACTGGCTACCAAGGCGAAATTCGTTACAACTGCAGGCAGGTTAACAATTATTAA 975 0.5231 MASQRCFCIVVYSLVFLGVANTALSSTSLSPDFYGHSCPKALDTIERVVQAAVYKERRMGASLLRLHFHDCFVNGCDGSILLDDSATIESEKKSLANVNSARGFEVIDEIKSAVDKACGGPVVSCADILAVAARDSVVALGGPSWKVRLGRRDSKTASRTEANAAIPAPSFSLSQLRNSFKNQGLSEKDLVVLSGGHSIGLAQCGTFKDRLYNESSEIDPSFAKDLKRGCPTDGGDANLAPLDPTAARFDVAYFSNLLRKKGLLHSDQQLFSGASTDALVQKYSYDTKAFRKDFANSMIKMGNIKPLTGYQGEIRYNCRQVNNY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0054 324 Gene3D Peroxidase, domain 2 167 301 - -
Prci12g0054 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 CDD secretory_peroxidase 29 321 IPR033905 GO:0004601|GO:0042744
Prci12g0054 324 Pfam Peroxidase 46 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 FunFam Peroxidase 167 301 - -
Prci12g0054 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Prci12g0054 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 SUPERFAMILY Heme-dependent peroxidases 29 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Prci12g0054 324 Gene3D - 32 319 - -
Prci12g0054 324 FunFam Peroxidase 32 182 - -
Prci12g0054 324 ProSiteProfiles Plant heme peroxidase family profile. 28 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci12g0054 324 PANTHER PEROXIDASE 72-RELATED 26 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0054 Prci-Chr12 462152 463551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0054 29 322 Peroxidase AT5G05340 58.923 3.38e-123 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0054 K00430 - gmx:102663236 462.225