Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0049 ATGCGGGATCCATACGACGTTGCCGTTGAGGAAGGCGCAGCACCGTCCGCGACCGTCGGAGAGGCATCCTCGGGTGTCGTTTTGCTGGGAAAATACGAGCTCAGAAAGTTGTTAGGGGTGGGAGCTTTTGCCAAGGTGTATCACGCCACGAATGTGAATACGGGACAGAGCGTGGCCATCAAAGCCATCAGCAAGCGCCAAGCTTTCAGAGCAGGTCTCGTGGCGCACGTTGAGAGGGAAATATCTATCATGCGCCGCCTCCACCATCCCCACACCCTCAAGCTCTTCGAAGTCCTCGCTTCCAAGACTAAAATTTACTTCGTCCTCGAGTTCGCCAAGGGCGGCGAGCTCTTTCACAAGGTCGCTCAGGGCCGAATCTCCGAAGATCTCAGCCGCCTCTACTTCCATCAATTAATCTCCGCCGTCCGATACTGCCACTCCGTCGGCGTATTCCACCGCGACCTCAAGCTCGACAACCTTTTGATCGATGAAAATATGGACCTCAAGGTTTCGGACTTCGGATTGAGCGCTCTCAAGGACCACATCAGACCCGACGGGTTGCTGCACACCGTCTGCGGCACGCCGGCTTACGTGGCGCCGGAGATGCTCGCCAAAAAAGGCTACGACGGGGCGAAGGTCGACGTGTGGTCGTGCGGAGTCATCCTCTTCGCCCTCACCGCTGGTTACCTGCCCTTCAACGACCAGAGTCTGGCCGTCATGTACAGGAAAATCTACAGGGGGCAGTTTCGGTTCCCGAGATGGACGTCGCCGGAGCTCCGGAGCTTCCTGTCACGGCTGCTGGACAAGAACCCCGAGACGAGAATCACGGTGGACGAGATCATCCGAGATCCATGGTTCAGCAAAGGGTATCAGGAGGTGCGAGTGCAGCACAAGGAAGTGGTCGGGGAACAGGAGAGCCGAGGGAGGGGATTGAACGCTTTCGATTTGATATCGTTCTCGTCCGGGCTGGACATGTCGGGCATGTTTATGGAAGCTGGAGTTTCGTATGGCGTGGAACGCATTGTTTCGGGGGAGAAAGCGGGGAACATAATGGGGAAGGTGGAAGAAGTGGCGAAAGCAGAGGGGGTGATGGTGACGAAGAGGGAGAACGAGGAGGGAGCGAAGCTGGAGGGACAAAAGGGTAATTTAGTGGTGGTTGTGGGCATTTACCGGCTAACGGATAAACTGGTAGTGGTGGAGGCGGAAACAAGAGAAAGGAGAGTGGGAAATGGTGCAAGATTTTGGGAGGAGAAATTGAAGCCAGAGCTTCGTAGATTAGCATATAAACCGGAAGCAGGTAAGGCGAACAGCGTATGA 1317 0.5566 MRDPYDVAVEEGAAPSATVGEASSGVVLLGKYELRKLLGVGAFAKVYHATNVNTGQSVAIKAISKRQAFRAGLVAHVEREISIMRRLHHPHTLKLFEVLASKTKIYFVLEFAKGGELFHKVAQGRISEDLSRLYFHQLISAVRYCHSVGVFHRDLKLDNLLIDENMDLKVSDFGLSALKDHIRPDGLLHTVCGTPAYVAPEMLAKKGYDGAKVDVWSCGVILFALTAGYLPFNDQSLAVMYRKIYRGQFRFPRWTSPELRSFLSRLLDKNPETRITVDEIIRDPWFSKGYQEVRVQHKEVVGEQESRGRGLNAFDLISFSSGLDMSGMFMEAGVSYGVERIVSGEKAGNIMGKVEEVAKAEGVMVTKRENEEGAKLEGQKGNLVVVVGIYRLTDKLVVVEAETRERRVGNGARFWEEKLKPELRRLAYKPEAGKANSV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0049 438 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0049 438 Pfam NAF domain 311 367 IPR004041 GO:0007165
Prci12g0049 438 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Prci12g0049 438 FunFam Aurora kinase A 26 115 - -
Prci12g0049 438 FunFam Non-specific serine/threonine protein kinase 112 293 - -
Prci12g0049 438 Gene3D Transferase(Phosphotransferase) domain 1 25 311 - -
Prci12g0049 438 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0049 438 Gene3D Kinase associated domain 1, KA1 312 429 - -
Prci12g0049 438 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0049 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Prci12g0049 438 CDD CIPK_C 312 424 - -
Prci12g0049 438 SUPERFAMILY Protein kinase-like (PK-like) 28 298 IPR011009 -
Prci12g0049 438 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Prci12g0049 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 26 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0049 Prci-Chr12 417310 419616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0049 18 435 CBL-interacting serine-threonine protein kinases AT2G30360 55.116 8.08e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci12g0049 Pkinase 2.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0049 - K12761 qsa:O6P43_034460 556.599