Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0046 ATGAGTTACAGCGACAGGAACAGAGGAGCAAAAGAGAGGGAATGTGAAGAGTCAGTCTTGCAGAATTCCGGGGAATTAGAGTCCAAATCGGTTGGGCAGAATGGATCGATTACAAGCCCACAGCTATCGATCGATGAGAATCTTCTGGTTGACCCTACACAACTCTTCATTGGTTCAAAAATCGGTGAAGGAGCTCATGGGAAAGTTTATGAAGGAAGGTATGGAGATCAAATTGTTGCAATTAAGGTTCTACATCGTGGGAGCACTTCAGAAGAAAGAGCGGCCCTTGAAAATCGTTTTGCTAGGGAGGTTAATATGATGTCCCGTGTCCATCATGAGAATCTGGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTTATAGTCACAGAGCTGTTACCAGGGATGTCGCTGAGGAAATATTTGACTAGTATACGCCCTGGACTATTAGACTGTCAGGTGGCTATAAATTTTGCCCTTGATGTTGCTCGGGCCATGGATTGCCTACATGCTAATGGGATCATACATAGAGATTTGAAACCTGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTCACTGAAATGATGACTGCAGAAACTGGAACTTACCGTTGGATGGCACCAGAGCTGTACAGTACCGTGACATTGCGTCAAGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTGTACAGCTTTGGAATTGTTTTGTGGGAACTTTTAACGAATCGCATGCCTTTTGAAGGGATGTCTAATTTACAAGCTGCTTACGCTGCGGCTTTTAAGCATGAGAGGCCAAGCCTTCCAGAAGACATACCTCCTGATCTTGCCTTTATAATACAATCATGCTGGGTTGAGGATCCAAACTTGAGGCCAAGCTTTAGTCAGATCATCCGTATGCTTAACCCCTTTCTCTTCACTTTGTCACCTGCACCGCCCTCCCCTTGTTTGCAGGAACCTGAAAATGTTGAACCTGAAGCTGCAGCAACTACAAGCAACGGTGCGATAACCGAGTTTTCTGCCCGAAACAGAGGGAAGTTTGGATTTCTTCGCCATTTGTTCACTTCCAAAAGGACCAAAAACTAA 1131 0.443 MSYSDRNRGAKERECEESVLQNSGELESKSVGQNGSITSPQLSIDENLLVDPTQLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPGLLDCQVAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKHERPSLPEDIPPDLAFIIQSCWVEDPNLRPSFSQIIRMLNPFLFTLSPAPPSPCLQEPENVEPEAAATTSNGAITEFSARNRGKFGFLRHLFTSKRTKN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0046 376 MobiDBLite consensus disorder prediction 1 20 - -
Prci12g0046 376 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Prci12g0046 376 Gene3D Transferase(Phosphotransferase) domain 1 138 339 - -
Prci12g0046 376 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Prci12g0046 376 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Prci12g0046 376 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Prci12g0046 376 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Prci12g0046 376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Prci12g0046 376 CDD STKc_MAP3K-like 61 316 - -
Prci12g0046 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Prci12g0046 376 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0046 376 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Prci12g0046 376 MobiDBLite consensus disorder prediction 1 34 - -
Prci12g0046 376 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0046 376 SUPERFAMILY Protein kinase-like (PK-like) 46 334 IPR011009 -
Prci12g0046 376 FunFam Kinase suppressor of Ras 1 44 134 - -
Prci12g0046 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0046 Prci-Chr12 363647 367917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0046 43 376 MAP Kinase Kinase Kinase AT5G01850 72.702 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci12g0046 PK_Tyr_Ser-Thr 8.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0046 - - vvi:100244846 610.142