Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0039 ATGGGGTGTTTTACAGTCTTGAAGAGTAAGAAGAAGAAATCCGAACAGATCAAGAATGTGAAACGGATTAACCATAAAGAGAACTTACCTGCTGCAGTACTACCTGAACCTCAAACTCATACACGCTCACTGCAGTCTGCACCTCCTAGTTTCAGGACAAGAGTGAAACCTATTCAACCCATTAATAACATCACCTACAGTAGAATACGAGCATTATCTGCCCCATCAACTCTTGATGCGGCTGAACAAGATGCTTTGGCATCTGTCGAGTATGAGGATCAAGATGAGTTAAAACACCGGGCTGGATCAATAAAGGAGCAGCGTTCATCCAGTCCGCAACCTTTACCTCTCCCATGTCCTCAGACTGGTGGTTCATTAAAGGCAACAAGCAGCTTTAAGTCAGCCACAGCTAGTGGTCCTCTCTGTGCTTCTGGTCCTTTGCCACTGCCACGTACCGGCTTACTTCGAAACTTTATGTATGAAGAAATTTCTGCTGCTTGCCACAATTTCTCTTCAGATCGGTGCATGTCAGAAGGTCTTTCTTCCACCATATTTAAAGCTTCTTTTGGTGATGATGTTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACTCGCCTTCATCCATCAGCTCAGGGTTTGAAGGAATTCATAAATGAGGTTAATATTATTGCATCTTTGCAACACCCGAACCTTTGTAAATTGCTTGGTTTTCATGCATGTGAGGGTTCAGAACTGAGAATGTTGGTTTATGAGAGGCTATATCACGGAAGCTTGGATCGCCTTTTGTATGGGAGATCTGATGGCCCGCCTATTGATTGGAATACAAGAATGAAAATTGCTTTATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACTGCCAATATACAGATTGACAAAGATTTTAGTGCAAAGCTTTCAGGCTATGGTTGTGTTGGACATATTGCTGAGGAAGAGGTTTCGAGCAATTCAACGGCTGTTGGAAACCTATCTGTAGAGACACTGGAAAGGGGAATGCTCACTCCAAAGAGCAACGTTTGGAGCTTTGGAATTGTTCTTCTGGAGTTACTGACCGGAAGAAAGAATCTTGACAGCCGTCGCCCAAAAGAAGAGAGGAATTTAGTCAAGTGGAGTCGGCCTTTCCTTGCAGATGATTGTCGGTTGTCATTGATTATGGATCCTCAACTTAAAAGCCGGTTTCCTTCCAAAGCAGTGAGGACAGTATCTGGCATTGCTCTGAGGTGCCTTCAAAACGAACCATCAGAAAGACCCACCATGAGAACTGTGGTTGAGCATCTCAGAAAAATACAGGATATGAAGCACTCTTGTCGGTTTCCATTGCAAGAGCCAGCAGCAATTTCCAGAAAACAGATGTCAAGGTCACCAAGTCTTAATGGAGTTGTTAATCCTGCATCTAGATTGAGCTTCTCACCATCACCGCCTTCGGCAGCCGGGCCATCGATTTCACCTCCAAGATGGTCTGGTGTGCCCCTCTTGCTTCCTCCCCGTGCTTGTTCCTCTACCCTTTCATTGGAGGAGCTTGATCGGCAAGAATCCCGGAAGTCATCATCCACTGTCTCCAGGAGGGCCAGTGTTGAAGGATTTTGA 1644 0.4471 MGCFTVLKSKKKKSEQIKNVKRINHKENLPAAVLPEPQTHTRSLQSAPPSFRTRVKPIQPINNITYSRIRALSAPSTLDAAEQDALASVEYEDQDELKHRAGSIKEQRSSSPQPLPLPCPQTGGSLKATSSFKSATASGPLCASGPLPLPRTGLLRNFMYEEISAACHNFSSDRCMSEGLSSTIFKASFGDDVSSSKKFEATVTRLHPSAQGLKEFINEVNIIASLQHPNLCKLLGFHACEGSELRMLVYERLYHGSLDRLLYGRSDGPPIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIAEEEVSSNSTAVGNLSVETLERGMLTPKSNVWSFGIVLLELLTGRKNLDSRRPKEERNLVKWSRPFLADDCRLSLIMDPQLKSRFPSKAVRTVSGIALRCLQNEPSERPTMRTVVEHLRKIQDMKHSCRFPLQEPAAISRKQMSRSPSLNGVVNPASRLSFSPSPPSAAGPSISPPRWSGVPLLLPPRACSSTLSLEELDRQESRKSSSTVSRRASVEGF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0039 547 MobiDBLite consensus disorder prediction 522 547 - -
Prci12g0039 547 MobiDBLite consensus disorder prediction 486 505 - -
Prci12g0039 547 MobiDBLite consensus disorder prediction 15 56 - -
Prci12g0039 547 MobiDBLite consensus disorder prediction 38 56 - -
Prci12g0039 547 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0039 547 Gene3D Phosphorylase Kinase; domain 1 150 251 - -
Prci12g0039 547 Pfam Protein tyrosine and serine/threonine kinase 175 445 IPR001245 GO:0004672|GO:0006468
Prci12g0039 547 PANTHER OS01G0588500 PROTEIN-RELATED 103 449 - -
Prci12g0039 547 SUPERFAMILY Protein kinase-like (PK-like) 149 456 IPR011009 -
Prci12g0039 547 MobiDBLite consensus disorder prediction 92 128 - -
Prci12g0039 547 Gene3D Transferase(Phosphotransferase) domain 1 253 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0039 Prci-Chr12 332904 337252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0039 156 445 Glycoside Hydrolase AT3G07070 38.176 2.05e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Prci12g0039 PK_Tyr_Ser-Thr 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0039 - - gmx:100809117 852.432