Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0036 ATGATGCAATTCACGTTCTTTCTACTCTTTCTTTTTGCTCCAATAGTAGTACTTTCCGACGCCGCAGCCTTCAACGACGACGTGTTGGCTTTGGTTGTCTTCAAAGCGGGTTTGCAAGACCCGAAAGCTAAGCTCTCTACTTGGAACGAAGATGATGATAATCCCTGCAAGTGGGTTGGAGTCAAATGTGATCCAACAACTAGTCGGGTCTCTGCCATTGTCCTTGACGGCTTTTCTCTTTCTGGGCACATTGATCGAGGGCTCTTGAGATTACAGTCCCTTCAAGTCCTCTCACTTTCCAAGAACAACTTCTCTGGGTCCATAAACCCAGATCTTCTTCGCCTTGGGAGTTTGGAAGTGGTGAACTTTAGTGAGAACAACCTCTCTGGGTCTATATCAGAAGGGTTCTTCCAACAATGTGGGTCTTTAAGATCAGTTTCATTTGCCAAAAACAATCTTACTGGTAAGATACCTGATTCCTTGAGTTCTTGCTCCTTGTTAGTTGCTGTTAACTTCTCTTCAAATCAACTAAATGGGAATTTACCTTCCGGGATATGGTTTTTGAGACAACTACAGTCCCTTGATCTGTCAAATAACTTGCTGGAGGGAGAGATTCCTGAGGGAATTGAGAATTTGAATGATTTGAAGGAGTTAAATCTACAGAGAAATCGCTTCATTGGGAGGCTTCCTGATGATATTGGAGGATGCATGCTCTTGAAGTCACTTGATTTCAGTGATAATTTTCTCTCTGGGGCAATTCCTGAGTCAACACAGGGACTTAACTCCTGCACATCCCTTAATTTACGCGGGAATTCATTCACAGGAGCGATTCCTGATTGGATTAGAGAATTAAAAAATCTCGAGATGTTGGATATTTCAGCAAATAGATTTTCTGGTTGGATTCCAAAATCAATAGGCAATCTCAACTTACTGACTAAATTAAATCTATCTAGGAATCATTTTACAGGAAACTTGCCCGAATCAATGGTAAACTGTGTTAAGCTTTTGGCTTTAGACGTCAGCCAAAATCAGTTGGAAGGTCCTCTTCCCTCATGGATTTTCAAGACGGGCTTACAAAGTATTTCACCTTCAGGGAACAGGTTCAATAGCAGCGATTATCCTTCATTTACCTCCATACCTGAATCTTATCATGGTCTTCAGGTTTTGGATTTGTCATCAAATGCGTTTTCTGGCAAACTTCCATCTAATCTTGGCGGCCTCAGTAGCTTGCAAGTATTAAATATGTCCGCCAACAATATCTCTGGTTCTATTCCAGCGGGTATAGGAGAACTTAAATCTTTATACATTCTTGACTTGAGCGACAACAAACTTAATGGAAGAATTCCTCCTGAACTAGAGGGGACTTCTTCACTCAGTGAACTGCGGTTACAGAACAACTCCCTAAGTGGGGAAATTCCAGCCCAAATTGAAAAGTGCTCTTCGCTAACAACTTTGATTCTTTCACACAACAAACTTACTAGTTCAATCCCTGCAGCCATGGCAAACCTGACTAATCTTAAGTATGTGGACTTGTCATGGAATAAACTCTCTGGAAGCTTACCCAAAAATCTCTCAAATCTTTCACACCTTTTATTTTTTAATGTCTCCTACAATCACCTTCAAGGGGAGCTACCAGTAGGCGGCTTCTTCAATATCATCTCTCCCTCTTCTGTCGCTGGTAATCCATCCTTGTGTGGTTCTGTTGTCAATCATTCCTGCCCTTCGGTCCATCCCAAACCTATTGTCCTAAACACCAATTCTTCTTACTCCAACTCCAACTCCAACTCCAACGCTTCCTCTCTAAACCATGGTCATAAAAAGATCATACTGAGTATTTCTTCTCTTATTGCTATTGGTGCCGCAGCTTTTATCACTATTGGTGTGGTGGCCATTACTGTCTTAAATATCCATGTTCGTCATTCAATGTCTCATTCTGCTGCCCCATTTGCATTCTCGGGTGCTCAGGACTATAGTTGTTCTCCTGCAAATGATCCAAACTATGGCAAGCTTGTTATGTTTTCTGGTGAGGCTGGTTTTGATGATGGGGCAAATAAGCTCCTAAACAAAGACAGTATAATAGGTCGTGGTGGATTTGGAACTGTTTATCACACTGTCCTCCGAGATGGGCATTCTGTTGCAATCAAGAAGCTTACAGTCTCTGGATTGATCAAGTCACAAGAAGACTTTGAGAGGGAAGTGAAAACTCATGCGACAATCAAACACCAGAATCTTGTGGGACTTAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTATCTATCTAGAGGGAGTCTGCATAAGCTTCTACATGAAGAAGATGAGCATAATAGAAACTTGCTTTCTTGGCGGCAAAGGTTCAAGATTATTCTTGGAATGGCAAGAGGGTTGGCTCATTTGCATCAAATGAATATAATTCACTACAATCTAAAGTCAACAAATGTTTTGATCGATTGCTCTGGTGAGCCAAAAATCGGAGATTTCGGCTTGGTGAGGCTGTTGCCGGTGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGGTACATGGCCCCTGAGTTTGCATGCCGGACAGTGAAGATAACTGAGAAATGTGACGTGTATGGCTTTGGGATCCTGGTTCTTGAGGTGGTGACTGGGAAAAGACCAGTGGAATATATGGAAGATGATGTGGTTGTTCTGTGTGATATGGTAAGGGGTATGTTGGAGGAAGGTAGGGTGGAGCAATGTGTGGACAGGAGGCTTCTGGGTAATTTTGTTGCTGAGGAAGCAATTCCTGTGATAAAATTGGGCTTAATTTGTGCATCACAAGTGCCTTCAAACCGCCCAGATATGGCCGAGGCAGTTAATATTTTGGAGTTGATCCAATGCCCTTCAGAGGGACAAGAAGAATTAGCATGA 2919 0.4221 MMQFTFFLLFLFAPIVVLSDAAAFNDDVLALVVFKAGLQDPKAKLSTWNEDDDNPCKWVGVKCDPTTSRVSAIVLDGFSLSGHIDRGLLRLQSLQVLSLSKNNFSGSINPDLLRLGSLEVVNFSENNLSGSISEGFFQQCGSLRSVSFAKNNLTGKIPDSLSSCSLLVAVNFSSNQLNGNLPSGIWFLRQLQSLDLSNNLLEGEIPEGIENLNDLKELNLQRNRFIGRLPDDIGGCMLLKSLDFSDNFLSGAIPESTQGLNSCTSLNLRGNSFTGAIPDWIRELKNLEMLDISANRFSGWIPKSIGNLNLLTKLNLSRNHFTGNLPESMVNCVKLLALDVSQNQLEGPLPSWIFKTGLQSISPSGNRFNSSDYPSFTSIPESYHGLQVLDLSSNAFSGKLPSNLGGLSSLQVLNMSANNISGSIPAGIGELKSLYILDLSDNKLNGRIPPELEGTSSLSELRLQNNSLSGEIPAQIEKCSSLTTLILSHNKLTSSIPAAMANLTNLKYVDLSWNKLSGSLPKNLSNLSHLLFFNVSYNHLQGELPVGGFFNIISPSSVAGNPSLCGSVVNHSCPSVHPKPIVLNTNSSYSNSNSNSNASSLNHGHKKIILSISSLIAIGAAAFITIGVVAITVLNIHVRHSMSHSAAPFAFSGAQDYSCSPANDPNYGKLVMFSGEAGFDDGANKLLNKDSIIGRGGFGTVYHTVLRDGHSVAIKKLTVSGLIKSQEDFEREVKTHATIKHQNLVGLKGYYWTSSLQLLIYEYLSRGSLHKLLHEEDEHNRNLLSWRQRFKIILGMARGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGMLEEGRVEQCVDRRLLGNFVAEEAIPVIKLGLICASQVPSNRPDMAEAVNILELIQCPSEGQEELA 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0036 972 SUPERFAMILY L domain-like 24 368 - -
Prci12g0036 972 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0036 972 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 383 449 IPR046959 -
Prci12g0036 972 Pfam Protein kinase domain 689 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0036 972 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Prci12g0036 972 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Prci12g0036 972 Gene3D Ribonuclease Inhibitor 24 302 IPR032675 -
Prci12g0036 972 SUPERFAMILY L domain-like 284 556 - -
Prci12g0036 972 SUPERFAMILY Protein kinase-like (PK-like) 689 962 IPR011009 -
Prci12g0036 972 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 304 577 - -
Prci12g0036 972 Pfam Leucine Rich Repeat 190 212 IPR001611 GO:0005515
Prci12g0036 972 SMART LRR_typ_2 308 332 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 479 502 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 407 431 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 503 526 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 188 211 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 284 307 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 115 139 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 527 551 IPR003591 -
Prci12g0036 972 SMART LRR_typ_2 212 236 IPR003591 -
Prci12g0036 972 Pfam Leucine rich repeat 481 540 IPR001611 GO:0005515
Prci12g0036 972 Pfam Leucine rich repeat 239 297 IPR001611 GO:0005515
Prci12g0036 972 Gene3D Phosphorylase Kinase; domain 1 681 763 - -
Prci12g0036 972 PRINTS Leucine-rich repeat signature 431 444 - -
Prci12g0036 972 PRINTS Leucine-rich repeat signature 191 204 - -
Prci12g0036 972 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 681 763 - -
Prci12g0036 972 Gene3D Ribonuclease Inhibitor 303 579 IPR032675 -
Prci12g0036 972 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 764 967 - -
Prci12g0036 972 Gene3D Transferase(Phosphotransferase) domain 1 764 970 - -
Prci12g0036 972 SMART serkin_6 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0036 972 SMART LRR_sd22_2 188 214 - -
Prci12g0036 972 SMART LRR_sd22_2 284 310 - -
Prci12g0036 972 SMART LRR_sd22_2 503 529 - -
Prci12g0036 972 SMART LRR_sd22_2 431 454 - -
Prci12g0036 972 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 25 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0036 Prci-Chr12 302333 305968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0036 4 972 Receptor kinase-like Gene Family AT3G56370 60.556 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Prci12g0036 Pkinase 3.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0036 - - gmx:100790365 1468.75