Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0032 ATGGAGAATCTTCTTTCGGATCGTGGAAAGGCAATCCAGGAACTGGAGAGAGGCCGCGAATTTGCTACCCAGCTTCGCCGGCTCATTCTCAACTCCAGCGGAGAAGGAGATGGCGAGGGAACGACACCGTTTGCCCAAGATCTCGCGGACAAGGTGTTGACCTCCTTTTCCAACGCCCTTTTACTCTTGAATCTCCACTCTCACGATTCCCAGATGCAACAACATTTTTCTTGCTTGCTTCCCGCTAAATCTGACGACTCTGAAGATAGTTGCAAGAGTACTTCCGCCGTCAAGGAACGAGCAAGAGGCTCTTATAAGAGAAGGAGAACATCGCAAACATCGGAGATAGACTCCGAAACTCCGATTGATGATGGCCACGCGTGGAGAAAGTATGGTCAAAAGAATATAATGAATGCTCCATACCCAAGGAACTACTTCAGGTGCAGTCATAGGTTTGATCAGGGATGCCAAGCAACCAAACAGGTGCAGAGAATTCAAGAGAAGCCTGAGCTGTACAGGACAACCTATCACGGCCATCACACCTGCAGCAGAAACTCGCTGAACAGCGACATCATTTTGGATGCTAATTCTCCTTCTCGCCCTTCCATATTTATCAGTTTTGACAATAACCTCCCTGCCAAACAAGCCTTCTTCTCGTCATCCTCGTCCTCATCTCTTCCCACGACCAAAACGCAGTGTAAGGAAGAAATTCCCTCGTCTTCATCGGAGGATTACCTACTCTCCCCGGAATCGAGCCACGAGGATCCCATTTCTGATATGCTGTACGGCGATCTGGTCTTTGGGCCTGAGCCCTTCGACTTTTGA 825 0.4909 MENLLSDRGKAIQELERGREFATQLRRLILNSSGEGDGEGTTPFAQDLADKVLTSFSNALLLLNLHSHDSQMQQHFSCLLPAKSDDSEDSCKSTSAVKERARGSYKRRRTSQTSEIDSETPIDDGHAWRKYGQKNIMNAPYPRNYFRCSHRFDQGCQATKQVQRIQEKPELYRTTYHGHHTCSRNSLNSDIILDANSPSRPSIFISFDNNLPAKQAFFSSSSSSSLPTTKTQCKEEIPSSSSEDYLLSPESSHEDPISDMLYGDLVFGPEPFDF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0032 274 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 216 IPR044810 GO:0003700
Prci12g0032 274 MobiDBLite consensus disorder prediction 219 262 - -
Prci12g0032 274 MobiDBLite consensus disorder prediction 82 125 - -
Prci12g0032 274 MobiDBLite consensus disorder prediction 219 247 - -
Prci12g0032 274 SUPERFAMILY WRKY DNA-binding domain 119 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g0032 274 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g0032 274 MobiDBLite consensus disorder prediction 85 125 - -
Prci12g0032 274 Gene3D WRKY domain 106 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g0032 274 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g0032 274 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0032 Prci-Chr12 263932 265996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0032 10 207 WRKY Transcription Factor Family AT3G56400 36.744 1.03e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci12g0032 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0032 - - gmx:100805895 244.973