Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci129g0001 ATGGCCAAAAGCGGCGGAAAGACGAGTAGCTCTTACTCTGCTGAAGTGAGTAGCATTGAATGGGAGTTCATTAACATGTCAGATCAAGAAGAAGATCTAATTCACAGAATGCACCGACTTGTTGGAGACAGGTGGGGCCTGATAGCTGGGAGGATTCCAGGACGAAAAGCTGAGGAGATTGAAAGGTTTTGGATGATGACATATGGAGAAGTGTTTGCCAGCAAACGAGAACAACTCAACAGACGAAGCTCTTCATGTTAA 261 0.4521 MAKSGGKTSSSYSAEVSSIEWEFINMSDQEEDLIHRMHRLVGDRWGLIAGRIPGRKAEEIERFWMMTYGEVFASKREQLNRRSSSC 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci129g0001 86 SMART sant 22 70 IPR001005 -
Prci129g0001 86 Pfam Myb-like DNA-binding domain 27 65 IPR001005 -
Prci129g0001 86 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 70 - -
Prci129g0001 86 FunFam MYB-like transcription factor 25 67 - -
Prci129g0001 86 SUPERFAMILY Homeodomain-like 27 67 IPR009057 -
Prci129g0001 86 CDD SANT 25 66 IPR001005 -
Prci129g0001 86 Gene3D - 27 68 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci129g0001 26 78 MYB Transcription Factor Family AT5G52600 49.057 1.03e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci129g0001 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci129g0001 K09422 - qsu:112022944 128.257