Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1293g0004 ATGCCTCCTCCTTCACTCTCTCCCTTCTTCGCTCTCTGCCTCCTCCTCTCCTTCCTCTCCCATCTAGCTTCTCCTCATCCTTGCTCTTCCCACCCCCACACTTCCTCTCCCTGCCCTCCTTTCCGTTCAATCCCTCCTTTTCCTTTCTCTTTCTCACTTGGCTGTGGCCACCCTTCCTTCCAAATCAACTGCTCTACTCCTCATTCCCTCATCTCCATCAACAACTTCACTTTCTCCGTTCTTCGCTATAACCCCAATTCCTCTTCTCTCACCCTCTTGCCTAATCTCCAACCTACAAGCTCCGCCGCCCCCGCCTACACAAATTGCTCCACTCCTCACTATCTTTCCCTTCTCAATCGCTCTCTTGATCTCTCTGGCTCGCCTTTCAGAATCTCCGATGCTTTCTGTTCCCGCATCTCTAATCTCCAAGCTTGCTCGCCTCCCCCTCTCCCAAACTGTAGCCACTGTCCTTGGGAATGTAGTCTCATCAAACCGGCTCACGTCCTCCGTGACTGTGGATCTGTCCATCATTCCGTTTCAGACTTGGAGAATCGCTGCCAGAGTGACGTTTTAGGGTATCTTGACGACATACTTGCTCGAGGGATCGACGTCGAGTGGGATGAAGCTCAAGATCCTTACTTTTCAAGCTGCAGAAACTGCAACGCCACCAAGGGAGTTTGTGGATTCAATTCATCCGACCCGCATGACCATTTTATGTGCATTCGGCCCGAATCCGAATCTAGTTTCACGCCTGCTTGGATTCAGAGGGTGAATCCCAAGCGTAACGCAGTTTTGTCCCTTGTAATCCCCTTAATGTTGTTGTTTCTTTTTGTTTCTATCGCTGTTGCAATTTTCCGCTCGAGGAGATTCAAGTCATCGAGGACAGAGGAGGACCCGACAATCCTTTTTCTTCACAACCAGCGCTCCGCGAGTCTTCTTCCTCCTGTCTTCACCTACGAGGAATTGGAGGCGGCCACTAATCGGTTCGACCCGAAACGCAAAATTGGCGATGGCGGGTTCGGGTCGGTGTTCCTGGGTCAACTCTACGATGGCAGAATCGTCGCCGTGAAATACCTCCACAAGCACCACGCTGAGGCCGCCGCGGGACGAGCCTTTTCCACCAAGTCTTTCTGCAACGAAATTTTGATTCTTTCTTCCATCGACCACCCGAATCTAGTCAAGCTTCATGGGTATTGCAGTGACCCGAGAGGATTGCTTCTGGTCTACGACTACGTCACCAACGGAACTCTCGCAGATCATCTTCATGGCCCCAAGATTTCATTCCGAAAAGGGTCTCTGACGTGGCAAGTGAGGATCGATATTGCTCTACAAACGGCATTAGCCATGGAGTATCTTCACTGCTCTGTTGTGCCGCCCATAGTTCATAGAGACATCACTTCGTCCAACATCTTCGTAGAGAAAGACATGAGGATTAAAGTTGGAGACTTTGGACTGTCTAGGTTGTTGGTTGTGCAGGATACGTCATCGTCGTCAACTGGGTTTGTCTGGACGGGGCCCCAAGGTACACCCGGTTACCTGGATCCGGATTACCACCGGTCGTTTCGGTTAACGGAGAAGAGCGACGTATATAGCTTCGGAGTGGTGCTGTTGGAGCTGATTTCCGGGTTAAAGCCAGTGGACCAGAGCAGGGACAAGCGGGAAATCGCGTTGGCCGATCTGGTGGTCTCGAGAATCCATATGGGTCAACTGGATCAAGTAGTGGATCCGTTTCTGGCGAAGGACGAGGAAGCGATGGACACCGTCACGGCGGTGGCGGAGCTGGCATTCCGTTGTGTGGCGGCGGACAAGGACGACCGTCCTGATTCGAAAGAAGTGGTGGAGGAGCTGAAGCGGGTACGGATCCGGTCACGGGCGGGGCTCAGATCGACGTCGATTTCCCACGCAGGTGCTGAGGTGGCAAAGAACTATGAAGTGAAGGGCTCTGGATTGTGA 1953 0.5233 MPPPSLSPFFALCLLLSFLSHLASPHPCSSHPHTSSPCPPFRSIPPFPFSFSLGCGHPSFQINCSTPHSLISINNFTFSVLRYNPNSSSLTLLPNLQPTSSAAPAYTNCSTPHYLSLLNRSLDLSGSPFRISDAFCSRISNLQACSPPPLPNCSHCPWECSLIKXPAHVLRDCGSVHHSVSDLENRCQSDVLGYLDDILARGIDVEWDEAQDPYFSSCRNCNATKGVCGFNSSDPHDHFMCIRPESESSFTPAWIQRVNPKRNAVLSLVIPLMLLFLFVSIAVAIFRSRRFKSSRTEEDPTILFLHNQRSASLLPPVFTYEELEAATNRFDPKRKIGDGGFGSVFLGQLYDGRIVAVKYLHKHHAEAAAGRAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVTNGTLADHLHGPKISFRKGSLTWQVRIDIALQTALAMEYLHCSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVVQDTSSSSTGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKPVDQSRDKREIALADLVVSRIHMGQLDQVVDPFLAKDEEAMDTVTAVAELAFRCVAADKDDRPDSKEVVEELKRVRIRSRAGLRSTSISHAGAEVAKNYEVKGSGL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1293g0004 651 ProSiteProfiles Protein kinase domain profile. 330 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1293g0004 651 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Prci1293g0004 651 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 623 IPR044652 GO:0004672
Prci1293g0004 651 SUPERFAMILY Protein kinase-like (PK-like) 311 617 IPR011009 -
Prci1293g0004 651 Pfam Protein kinase domain 332 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1293g0004 651 FunFam Putative serine/threonine-protein kinase At1g18390 family 306 412 - -
Prci1293g0004 651 Pfam Wall-associated receptor kinase C-terminal 172 243 IPR032872 -
Prci1293g0004 651 ProSitePatterns Tyrosine protein kinases specific active-site signature. 461 473 IPR008266 GO:0004672|GO:0006468
Prci1293g0004 651 Gene3D Phosphorylase Kinase; domain 1 306 412 - -
Prci1293g0004 651 Gene3D Transferase(Phosphotransferase) domain 1 413 635 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1293g0004 38 643 Receptor kinase-like Gene Family AT1G69910 62.560 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci1293g0004 Pkinase 5.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1293g0004 - - qsa:O6P43_033079 870.537