Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci127g0003 ATGGAGCTTACTCAGCTCGGTTTTCTGGAGGAACTACTAGCTCCAAGAAGAGACACTTGGAGCACTTTTTCCTCTGGATTGGGCGAGATGTTCCCCAATAATGATTGGAGTTTTGATTCTTTTGAAGAGATCCCACATTTAGCTCCTTTGAATCCTCTATTACCTTCATTTTCCGCTCCACTGGACCCTAGATTTGAGTGTCCATACACTAATGAAGCAGCAGCAGCATACCCTTCTGTTGATGGATTCACCGTAACAGAGCTTGACTCTACATTCGGCAGGAATGGAGATTCAACACTATTTCCTGCACAAGAAAGTAACCCATCAATAGAGGATGAAGAGTTTGGCTTTCTGGGGAGTGAAAATCAGAGCCTTGAAGAGATGAACACTGCCTGCAAAGTTGAGGAACAAGCCACTGAAGTTCCAGTCTTCAACATGGGTTTGTGTGGGGAGAAAAAACCCAAGTCCAAGAAGCTGGAAGGGCAGCCCTCAAAGAATCTAATGGCAGAAAGAAGGAGAAGAAAGCGCCTCAATGATCGCCTTTCCATGCTAAGGTCAATTGTTCCAAAGATCAGCAAGATGGACAGGACCTCTATTCTTGGAGACACCATAGACTATATGAAGGAGCTTCTAGAAAGGATAGGTAAGTTGCAAGAAGAAAGAACCGAAGAGGGGATAAAACAGATAAACCTCATGGGTAAATCCAAAGAGATGAAGCCAAATGAAGTGATGTTTGAGGTAGAGAAGAGAGACCAGGACACAAAAGTCAGTATCTGTTGTGGCACAAGGGCTGGATTGTTGCTATCAACAGTGAACACCCTTGAAGCATTAGGCCTTGAGATTCAACAATGTGTTATAAGCAGCTTCAATGATTTTTCGATGCAAGCATCTTGCTCAGAGGTAGCCGAGCAGAGAACTAGCATTAGCTCTGAAGAGATAAAGCAAGCACTGTTCAGAAATGCCGGATATGGCGGGAGATGTCTATAG 987 0.4407 MELTQLGFLEELLAPRRDTWSTFSSGLGEMFPNNDWSFDSFEEIPHLAPLNPLLPSFSAPLDPRFECPYTNEAAAAYPSVDGFTVTELDSTFGRNGDSTLFPAQESNPSIEDEEFGFLGSENQSLEEMNTACKVEEQATEVPVFNMGLCGEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEERTEEGIKQINLMGKSKEMKPNEVMFEVEKRDQDTKVSICCGTRAGLLLSTVNTLEALGLEIQQCVISSFNDFSMQASCSEVAEQRTSISSEEIKQALFRNAGYGGRCL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci127g0003 328 Pfam Helix-loop-helix DNA-binding domain 167 210 IPR011598 GO:0046983
Prci127g0003 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 210 IPR011598 GO:0046983
Prci127g0003 328 Gene3D - 153 225 IPR036638 GO:0046983
Prci127g0003 328 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 99 322 - -
Prci127g0003 328 SMART finulus 167 216 IPR011598 GO:0046983
Prci127g0003 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 225 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci127g0003 152 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 66.854 4.13e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci127g0003 HLH 6.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci127g0003 - - gmx:100806571 486.493