Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1273g0002 ATGGAGGGAACTGAAATTGATGCAAGAAGTGGATTCTGCAAATCCAACTCCATCTTCTACAATAAACGGAAGCCACTGCCGCTTCCTCAAAAGTACTCACTCGACGTCACCGCTTTCATCTCCTCCCGCGCCCACCACGGCAAGCTTGGTTTCATCGACGCCGCCACTGGCCGCCACTTCACCTTCCACCAACTCTGGCAGGCTGTCGATGCCGTCGCCACCTCTCTCTCTGACATCGGTATTCGAAAGGGCCACGTCGTCCTCCTTCTTTCCCCCAATTCCATTTACTTTCCCGTCGTCTGTCTCGCTGTCATGTCCCTTGGGGCTATCATCACCACCCGCGAAATCTCCAAGAAAATCTCCGATTCCAAGCCTTCCCTTGCCTTCACGATTCGGCCCCTACTAGCCAAAATCACCGCAATTTCAAATGTACCGATCGTTCTCATGGAGGAAGACGAAGGCGCCCCCATCACAGAGCCTAAAATCGTGACCACGCTGGGCGAGATGATGAAGACGGAGCCCCGTGCTAGCCAAGTCAGGGATCGAGTTTACCAAGATGATACTGCGACTTTACTGTATTCGTCTGGTACCACGGGTCCAAGTAAAGGCGTGGTCTCGACGCACCGGAATCTAATGGCAATGGTCCAGATATTTTCGAGTCGACTCAATATGGATAAGGAGGAGACTTTCATATGCATTGTCCCTATGTTCCATATATACGGTCTGGTGGTGTTCGTAACTGGCCTTCTGGCTGCAGGATCGACGACAGTGGTGCTGTCCAAGTACGACATGGACGATATGCTATGGGCGATCCAGCAGTACCGTGTGACGTACCTGCCGCTAGTGCCGCCTATATTGGTGGCGATGATAAATGGGGCGGATGCGATAAAGGCGAAGTACGACTTGGGGTCACTGCATTCGGTGGTGTCGGGTGGGGCTCCACTGAGCAAGGGGGTGATAGAGGGCTTTGTGGACAAGTTCCCGAACGTCACAATTCTCCAGGGTTACGGGTTGACCGAATCCACGGGAGTCGGGGTATCCACGGACTCACTCGAGGAGAGTCGGAGGTACGGTACGGCGGGGCTGTTGTCACCGGGCATGCAGGCCAAGGTCGTTGATCCTGAAACTGGAAAGGCTTTGCCGGCTAATCGGACCGGTGAGCTCTGGCTCAGAGGGCCCACTATCATGAAAGGTTATTTCAGTAATGAGGAAGCAACCACCTCAACCCTTGATTCAGAGGGATGGTTGAGGACTGGGGATATTTGCTACATTGATGGCGACGGATATATTTTCGTTGTTGATAGGTTGAAAGAGCTTATTAAATACAAGGGATATCAGGTCCCCCCAGCAGAACTAGAAGCCTTGTTGCTTACTCATCCTGCAATTTCAGATGCAGCTGTCATACCGTTCCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATACGTAGTGAGGAAAAGTGGAAGTCATGTATCTGAAAAGGAAATCATGGATTTTGTGGCAGCACAGCGTAACAAGTTGATGTGGCTGGTTGAAAAAGGCTGCTCCATACAAAAGAATTCGAAGAGTGGCATTTATTTCTTCAATACCAAAGAACGCATCAGGAAAAATCATCAGGAAGGATCTCATCAAGCTCGCCACATCTAA 1647 0.5112 MEGTEIDARSGFCKSNSIFYNKRKPLPLPQKYSLDVTAFISSRAHHGKLGFIDAATGRHFTFHQLWQAVDAVATSLSDIGIRKGHVVLLLSPNSIYFPVVCLAVMSLGAIITTREISKKISDSKPSLAFTIRPLLAKITAISNVPIVLMEEDEGAPITEPKIVTTLGEMMKTEPRASQVRDRVYQDDTATLLYSSGTTGPSKGVVSTHRNLMAMVQIFSSRLNMDKEETFICIVPMFHIYGLVVFVTGLLAAGSTTVVLSKYDMDDMLWAIQQYRVTYLPLVPPILVAMINGADAIKAKYDLGSLHSVVSGGAPLSKGVIEGFVDKFPNVTILQGYGLTESTGVGVSTDSLEESRRYGTAGLLSPGMQAKVVDPETGKALPANRTGELWLRGPTIMKGYFSNEEATTSTLDSEGWLRTGDICYIDGDGYIFVVDRLKELIKYKGYQVPPAELEALLLTHPAISDAAVIPFPDKEAGQYPMAYVVRKSGSHVSEKEIMDFVAAQRNKLMWLVEKGCSIQKNSKSGIYFFNTKERIRKNHQEGSHQARHI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1273g0002 548 SUPERFAMILY Acetyl-CoA synthetase-like 45 509 - -
Prci1273g0002 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 507 - -
Prci1273g0002 548 Pfam AMP-binding enzyme C-terminal domain 451 503 IPR025110 -
Prci1273g0002 548 Gene3D - 17 437 IPR042099 -
Prci1273g0002 548 CDD 4CL 28 503 - -
Prci1273g0002 548 Pfam AMP-binding enzyme 45 442 IPR000873 -
Prci1273g0002 548 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Prci1273g0002 548 Gene3D - 438 520 IPR045851 -
Prci1273g0002 548 FunFam Long-chain-fatty-acid--CoA ligase FadD 20 437 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1273g0002 6 503 Monolignol Biosynthesis Gene Families AT1G20500 61.811 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1273g0002 K10526 - qsa:O6P43_016337 761.911