Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1268g0001 ATGGGATCTCGGATGAAAGAAGATGATAGAATTGAAAGAGAAATCCGAAGTCTCTCGAAACTTCCTGAGAATCGGAGATGTATCAACTGCAATAGTTTGGGACCACAATATGTCTGCACCACCTTTTGGACATTCGTCTGCACAAACTGCAGCGGAATTCAACGAGAGTTTAACCATAGAGTAAAATCAGTATCAATGGCTAAATTTACTGCAGAAGAGGTCACTGCTCTTCAAGCAGGCGGCAATAAAAAAGCAAAGCAGATTTATCTTCAAGACTGGGATCCTCATCGTCATTCTTATCCCGATACCAATAACATACCTAGACTTCGCGATTTCATCAAGCAAGTTTATGTGGATAGAAAATTCAGCGGTGAAAGGACACAGAAGAATCTTCCCAGACTCAGATTAAATAACAAGGAGGAGTCCTACGACAGAAGGAAGCTCAGTTTTTCCCGAAGAGAACGTTATGAAGATGGAAATGACATGCACAGTCCTAGTTCACGAAACGAGGACAGGAGTGTCAAGTATTATTATGATGATAGAAGAAGTCCCAGATATGCCCCGAGGAATGGGAACCCCCGAAGAAATCCCATAAAAATTGAGGTTGTTGATGATAGGTTCAGAGACGATGAATCTATAACTCGCAGGTTTTCAAGCATAGAGTCAAAGCAAATAGCGGTTCCATCTGATGGTCAAAAGAATGTGGACAGAGGGAAGAAGGTTCCACTTGCCAGTGGCGGGGGATCCGCTAAGGAGAATCCAGCCGAACAAAAAAGCCCAGAAACCCAAATTTTGAGTGTCGTCACATCACAGGTTTCTGATGCTGCAACTGCACCGGAAGCTCAGTTTACGCCTCAATCAAATGATGAAAGTGACTGGGCTCCATTTGAAATTTCCACAGAAAAGGAGCCTTCTCAAACGCCATTTACAAATATCTCGAAGTCTTCTACAACAGAGACAACAACTTATACAAAAGAGACAACTAAAACTTTAGATGCTGTAGAATTTTTACTCTCTGAATTGTCTGGTCCCTTGTATGCAACAGCTAGTAGTGCGTCTGAAGTTCATGCTGCTGATAATGATACTTCAACTGCGAGAGCAGAATATATCTCTGTGGATGGGGATTTAGCACCTCCGACCTCAGCAGGCCAGATAACTCCATTTCCCAACAACTTTGGTGCTTCCTCAGATGCATCAACCAGTGACTCTAATCTGACCCAACCCTCAACAGCTTACAGCTCTGCGATACAATCAGCGAGTCCATCAGTCAGAGATGTCCCTTCGCTTAATCAGCCAACAGTTGCTCTAAAAGCGCCAGACGTTTCAAGCTCTCTTATGGAACTATCTCCTCAAGTTCCATCAAAACTTTCTCAAGACTCCAGACCTGATGTTGGAAGCCAACCAAGGATAACACAAACCAAGTCTATGGGAAGAAAGGAAATTCCGGCGAACCTATTTACTATAAGCTACTTACCAGGACCAGCACCGCAAGCAGGCTGGCAGAATTTTCAACCTCATAATATGGGATACGGCTTGCAGTATTATTCTAATACAGCACCATTCTCGGCATTTCCCGCGGCAGCAAAGTCCACAAACCCATTTGATATAACTGACGGGAGACCTCAAGTCCGTGCTTCTCCATTTCCTGCTATGGCAAATTTGCATGGCGCACATATGTCAACTGGAGCAGGATTAGTGCGTGCTTCAAGCCTTGGGGCCTTAGGGTCAATGGTGCCTCCATCCCCAAATTATGCTTCTTCTTCAATGCCTCCGCAATCTCCCTTTACTCCCGGATCTTCTTCTGGTCCATACTTCGAGCAACTTAACAATAATATGCTAGCTCCCAGACCCCAAAGAACTGGAAGCTTCAATAATGGTGAAACAACCTCTCAACATACAGCGAGTGGATACATGGCTCCCGGCTACACTCTAAATTCTTTTCCCAAGATCACAGGAGGAAATCCATTTGGATAG 1974 0.4422 MGSRMKEDDRIEREIRSLSKLPENRRCINCNSLGPQYVCTTFWTFVCTNCSGIQREFNHRVKSVSMAKFTAEEVTALQAGGNKKAKQIYLQDWDPHRHSYPDTNNIPRLRDFIKQVYVDRKFSGERTQKNLPRLRLNNKEESYDRRKLSFSRRERYEDGNDMHSPSSRNEDRSVKYYYDDRRSPRYAPRNGNPRRNPIKIEVVDDRFRDDESITRRFSSIESKQIAVPSDGQKNVDRGKKVPLASGGGSAKENPAEQKSPETQILSVVTSQVSDAATAPEAQFTPQSNDESDWAPFEISTEKEPSQTPFTNISKSSTTETTTYTKETTKTLDAVEFLLSELSGPLYATASSASEVHAADNDTSTARAEYISVDGDLAPPTSAGQITPFPNNFGASSDASTSDSNLTQPSTAYSSAIQSASPSVRDVPSLNQPTVALKAPDVSSSLMELSPQVPSKLSQDSRPDVGSQPRITQTKSMGRKEIPANLFTISYLPGPAPQAGWQNFQPHNMGYGLQYYSNTAPFSAFPAAAKSTNPFDITDGRPQVRASPFPAMANLHGAHMSTGAGLVRASSLGALGSMVPPSPNYASSSMPPQSPFTPGSSSGPYFEQLNNNMLAPRPQRTGSFNNGETTSQHTASGYMAPGYTLNSFPKITGGNPFG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1268g0001 657 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Prci1268g0001 657 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Prci1268g0001 657 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Prci1268g0001 657 MobiDBLite consensus disorder prediction 255 324 - -
Prci1268g0001 657 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Prci1268g0001 657 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Prci1268g0001 657 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Prci1268g0001 657 MobiDBLite consensus disorder prediction 129 187 - -
Prci1268g0001 657 PANTHER ARFGAP/RECO-RELATED 245 657 IPR044820 GO:0005096
Prci1268g0001 657 MobiDBLite consensus disorder prediction 224 324 - -
Prci1268g0001 657 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Prci1268g0001 657 CDD ArfGap_AGFG 12 122 - -
Prci1268g0001 657 ProSiteProfiles ARF GTPase-activating proteins domain profile. 9 130 IPR001164 GO:0005096
Prci1268g0001 657 MobiDBLite consensus disorder prediction 383 427 - -
Prci1268g0001 657 MobiDBLite consensus disorder prediction 441 474 - -
Prci1268g0001 657 MobiDBLite consensus disorder prediction 374 427 - -
Prci1268g0001 657 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Prci1268g0001 657 MobiDBLite consensus disorder prediction 129 198 - -
Prci1268g0001 657 MobiDBLite consensus disorder prediction 582 631 - -
Prci1268g0001 657 MobiDBLite consensus disorder prediction 444 474 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1268g0001 12 122 C2H2 Transcription Factor Family AT4G05330 32.479 2.03e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1268g0001 - - pcin:129299733 1290.4