Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1267g0003 ATGCCTGAAAGAGATTCCACTAAGCTGCTAGCATTATGGTGTATTCTCTGCATATTCTCCTGTGTTGCTTCCTTTGCAAATGCTGCCACTGATGATCATAGCGAAGCAAAAGCTTTGCTGAACTGGAAAGCCAAACTTAATGATGAAAGCAAAGCTACCTTGTCCTCTTGGAAGAATGACAGTAATCCTTGCAGGCAGAACTGGAAGGGAATTTCATGTGACGGATCCATGTCCGTGATCAACATCAGTCTACGAAATCTCAACCTACAAGGTACTCTTGCGAGTCTCAACTTCACTTCCTTTCCTAATCTGCAAAATTTTGATCTGAGTTTCAACCGATTTTATGGAAACATTCCCCATGAAATTGGTAACTTGTCCAGTATTTTGAAGCTGCAACTGTCAGGTAATTCATTTAGTGGTCCCATCCCTCCTGAAATCGGGAAACTAACCAGCCTGAATAATCTTGATCTTGGTGGATGTAATCTCAGGGAGCAAATTCCCCAAGAAATTGGCAATTTGAGGAATTTGACGCTCCTATCGCTTCTCCGAAACTCCCTTTCTGGTCCCATTCCAGAAGAGATTGGATTGTTAAGTAATCTTTTGAAGCTTTATTTGGGAGAAAACTCTCTGTCAGGTAGAATCCCATCATCAATTGGAAACTTGACCAAGTTACAAGAAATTTATCTTCATGAGAACAATCTCTCGGGTCCTATTCCTAATGGATTCTGGAAACTCTATTCTCTCACTGTCATTTATTTATATTCTAACGGACTCTGGGGGCCAATCTCTCCCTTTATTGGAAACCTAACAAAACTAACAGAATTGGCCTTGTATGAGAACAATTTTTCCGGTCCAATTCCTTCGTCCATTGGTAACTTGATCAATGTGCCTGAGATCTATCTTCAAAACAACAGTTTTTCAGGATCCATTCCTTCCACTGTAGGAAATTTGACAAAGCTCAGCGTCCTAATCTTGGGCGCCAACAATCTCACTGGTCAACTTCCACAAGAAATGAATAATTTGACAGCTTTGTATAACATACAACTGAGTTATAATCATTTCACTGGCCCTTTGCCACAACAAATTTGTCAAAGTGGGACGTTATTTAGGTTTTCTGCTAATGATAACCATTTCAACGGTCCTATTCCAACGAGTCTGCAGAATTGTTCTAGTCTAGAAAGACTCAGGCTTGATAATAACCAGTTAGTTGATAACATGACAAATGCTTTTGGAGTATATCCTTATTTGAACTCCATTGATCTAAGTGGCAATAAATTGTATGGCCGCCTTTCATCCACGTGGGGCAAGTGTTCAAACCTCACGCAACTGTTTATTCATAATAACGAGCTTTCTGGTGTTATACCACCAGAACTAGGAGAGGCGAGTAAGCTTGGTGAACTTAACTTGTCTTCAAATCATTTGTCTGGACAAATTCCAAAAGAGCTAGGGAAGTTGACCTCGTTGACACGACTCTCTTTGAGCCACAATAACTTTTCAGGCAATATCCCCTCAGAAATAAGATCACTTAGTCAACTTACAGATTTGGAGTTAGCTGCAAATAATTTCAATGGCTCAATCGCAAGAGAGGTTGGAGAATTAAAAAGCTTAATTTTCTTGAATTTGAGCAAAAACAGATTTGGTGGAAGCATTCCCCCTGAGTTTCGTGAACTCAAAGACCTTGAGCAACTTGATCTCAGTGACAATTTGCTGATTGGAACAATACCAGCAACATTTGGAATGTTAACCAAGTTGGAAGTATTGAACCTCTCGCATAATCATCTCTCTGGCACCATTTCTTCCATTTTCGGTCCAATGTCAGCTTTGTCTACTGTTGACATATCATACAATCAATTAGAAGGTCCCGTTCCAAAAAATCAAGCCTTTCAAAACTTCGCTGCTTTGAGGAATAATAAAGGCTTGTGCGGTAACGTCACTGGTTTGAATCCATGTGGTGATCTCGAACCCAAACCAAATGGACAGAGCCATAGGATCAGAGTTTTCTTGATAATATTCCTCCCATTGGCCATACTGCTATTACTACTTGTTGGAGCATTATGCTTTTTTTATCGAAGAGCAACAAAAACAAAAAGCAAAGATGGAGAAGCATCGCCAGAAGAGACTTATTTTGTGGGGAGTCTGGGAAAAGAAATAACGCACCAAGATATCATCAAAGCCACAGAGGAATTTGATGACAAATATCTTATAGGGAAAGGGAGACAGGGAAGTGTTTATATAGCTGAGTTGCCCACAGGTGATGTTTATGCTGTAAAGAAGCTTCATTCAATACCAAGTGGGGAAATCTCCAACCAGAAAGCTTTTACAAGTGAGATTCGAGCTTTGACAGAGATCAAACATCGTAACATTGTGAAGCTGCATGGGTTTTACTCCAATTCACAATTCTCCATTTTGGTTTATGAGTTCCTCGAAGGTGGCAGCTTAGACAACATACTAAAGAATGAGAAACAAGCCACTGAGTTTGACTGGAATAAGAGGGTGAATGCTGTTAAAGGTGTGGCTAATGCATTATTCCACATGCATCATGGCTGTTCAATCCCTATTGTTCATCGTGACATATCAAGCAAGAACATTCTTCTAAGTTCAGAATATGAAGAAGCTCACATCATTGACTTTGGAACGGTGAAGTTTTTGAATCCTGACTCAAACAACATGACCACATTTGCTGGAACTTTTGGGTATGCTGCACCAGAGATTGCTTTCATTATGCAAGCCAACGAGAAATGTGATGTTTATAGCTTTGGAGTGTTGACTTTAGAAATCATTATGGGGACACATCCTGCAGAGCTTGTTTTATCTTTGGCAGACAAATCAACCACTGATGACTTCTTGTTGAAGGATGTGTTGGACTCACGACTTTTTCCACTCAGAAAACCAGTCCTAGATGAGGTGATCTTGGTTGCAAAAATAGCATTTTCTTGCTTGAATGAGAATCCCCGGTCTCGTCCAACCATGGAACAAGTGTCTAAGGAACTTGCGAAGCCACCAAAATCTCATTCAGAGGATCAATTTCACACCATCACAATTGGACAACTCATGAGGGATTGA 3063 0.4019 MPERDSTKLLALWCILCIFSCVASFANAATDDHSEAKALLNWKAKLNDESKATLSSWKNDSNPCRQNWKGISCDGSMSVINISLRNLNLQGTLASLNFTSFPNLQNFDLSFNRFYGNIPHEIGNLSSILKLQLSGNSFSGPIPPEIGKLTSLNNLDLGGCNLREQIPQEIGNLRNLTLLSLLRNSLSGPIPEEIGLLSNLLKLYLGENSLSGRIPSSIGNLTKLQEIYLHENNLSGPIPNGFWKLYSLTVIYLYSNGLWGPISPFIGNLTKLTELALYENNFSGPIPSSIGNLINVPEIYLQNNSFSGSIPSTVGNLTKLSVLILGANNLTGQLPQEMNNLTALYNIQLSYNHFTGPLPQQICQSGTLFRFSANDNHFNGPIPTSLQNCSSLERLRLDNNQLVDNMTNAFGVYPYLNSIDLSGNKLYGRLSSTWGKCSNLTQLFIHNNELSGVIPPELGEASKLGELNLSSNHLSGQIPKELGKLTSLTRLSLSHNNFSGNIPSEIRSLSQLTDLELAANNFNGSIAREVGELKSLIFLNLSKNRFGGSIPPEFRELKDLEQLDLSDNLLIGTIPATFGMLTKLEVLNLSHNHLSGTISSIFGPMSALSTVDISYNQLEGPVPKNQAFQNFAALRNNKGLCGNVTGLNPCGDLEPKPNGQSHRIRVFLIIFLPLAILLLLLVGALCFFYRRATKTKSKDGEASPEETYFVGSLGKEITHQDIIKATEEFDDKYLIGKGRQGSVYIAELPTGDVYAVKKLHSIPSGEISNQKAFTSEIRALTEIKHRNIVKLHGFYSNSQFSILVYEFLEGGSLDNILKNEKQATEFDWNKRVNAVKGVANALFHMHHGCSIPIVHRDISSKNILLSSEYEEAHIIDFGTVKFLNPDSNNMTTFAGTFGYAAPEIAFIMQANEKCDVYSFGVLTLEIIMGTHPAELVLSLADKSTTDDFLLKDVLDSRLFPLRKPVLDEVILVAKIAFSCLNENPRSRPTMEQVSKELAKPPKSHSEDQFHTITIGQLMRD 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1267g0003 1020 Gene3D Ribonuclease Inhibitor 32 258 IPR032675 -
Prci1267g0003 1020 PRINTS Leucine-rich repeat signature 560 573 - -
Prci1267g0003 1020 PRINTS Leucine-rich repeat signature 581 594 - -
Prci1267g0003 1020 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Prci1267g0003 1020 SUPERFAMILY RNI-like 274 623 - -
Prci1267g0003 1020 FunFam Leucine-rich repeat receptor protein kinase MSP1 691 807 - -
Prci1267g0003 1020 SUPERFAMILY Protein kinase-like (PK-like) 710 997 IPR011009 -
Prci1267g0003 1020 ProSiteProfiles Protein kinase domain profile. 729 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1267g0003 1020 Gene3D Ribonuclease Inhibitor 259 364 IPR032675 -
Prci1267g0003 1020 Pfam Protein kinase domain 731 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1267g0003 1020 Gene3D Phosphorylase Kinase; domain 1 690 807 - -
Prci1267g0003 1020 FunFam MDIS1-interacting receptor like kinase 2 808 1003 - -
Prci1267g0003 1020 SMART LRR_typ_2 485 509 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 389 412 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 101 125 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 533 556 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 317 341 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 581 604 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 557 580 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 149 173 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 221 245 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 269 293 IPR003591 -
Prci1267g0003 1020 SMART LRR_typ_2 197 220 IPR003591 -
Prci1267g0003 1020 Gene3D Ribonuclease Inhibitor 365 657 IPR032675 -
Prci1267g0003 1020 FunFam Nuclear pore complex protein NUP107 32 191 - -
Prci1267g0003 1020 ProSitePatterns Tyrosine protein kinases specific active-site signature. 853 865 IPR008266 GO:0004672|GO:0006468
Prci1267g0003 1020 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 342 654 - -
Prci1267g0003 1020 Gene3D Transferase(Phosphotransferase) domain 1 808 1015 - -
Prci1267g0003 1020 FunFam Leucine-rich receptor-like protein kinase family protein 238 336 - -
Prci1267g0003 1020 Pfam Leucine rich repeat 199 258 IPR001611 GO:0005515
Prci1267g0003 1020 Pfam Leucine rich repeat 438 498 IPR001611 GO:0005515
Prci1267g0003 1020 Pfam Leucine rich repeat 539 594 IPR001611 GO:0005515
Prci1267g0003 1020 SUPERFAMILY RNI-like 81 364 - -
Prci1267g0003 1020 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 246 998 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1267g0003 15 906 Receptor kinase-like Gene Family AT4G08850 42.672 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci1267g0003 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1267g0003 - - pcin:129295243 1279.62