Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1251g0002 ATGGAAGGCCAAGAAATTGCTGTGAAAAGGTTATCAAGAAACTCTGGGCAAGGAACTGAACAATTTAAGAATGAGGTCAGGTTATTAGTGAGACTTCAGCATCGAAATCTTGTTCGGTTGTTTGGTTGCTGTGTTGAGATGGATGAGAAGATGCTAGTTTATGAGTACATGGAGAATAGAAGCCTTGATTCCATTTTGTTTGACAAAGCAAGAAGATCCATACTAAATTGGCAAAAGCGCTTCCACATTATATGTGGCATTGCAAGAGGACTTCTTTACTTGCATCAAGATTCTAGATTTAGGATCATCCATAGGGATCTTAAAGCCAGCAACGTCTTACTTGATGAAGAAATGAATCCAAAAATATCGGATTTTGGAATGGTTAGAATTTTTGGAACAAATCAAACAGAAGCAAATACAATAAGAGTTGTTGGAACATATGGTTACATGTCTCCAGAATACGCCATGGATGGACTCTTCTCAATAAAGTCTGATGTTTTCAGTTTTGGCGTTCTAGTACTTGAGATCATAACTGCCAGGAAGAACAGAGGGTTCTATTACTCAAACGACGAATTAAATCTTCTTGGACATGCATGGAATCAATGGAAAGAAGGAAAAGCACTTGAAATGATCGATCCATCGATCGCGGATTTATATTCGCCATCCGAAGTTCTTCGATGCATACAAGTCGGACTCCTATGTGTCCAAGAGCGTGCAGAAGATCGACCTACCATGCCCACCGTGGTATTGATGTTGAGTAGTGAAACTGTATTGATGCCACAACCTAAAACCCCTGGCTTTTGCGTAGGAAGAAACCCTAATGAAACAGAGTCTTCTTCAAGTAAACAAGACCAATCATACAGTGTGAATGAAGTCACAGTCACAATGCTACATGCTAGGTAG 903 0.3976 MEGQEIAVKRLSRNSGQGTEQFKNEVRLLVRLQHRNLVRLFGCCVEMDEKMLVYEYMENRSLDSILFDKARRSILNWQKRFHIICGIARGLLYLHQDSRFRIIHRDLKASNVLLDEEMNPKISDFGMVRIFGTNQTEANTIRVVGTYGYMSPEYAMDGLFSIKSDVFSFGVLVLEIITARKNRGFYYSNDELNLLGHAWNQWKEGKALEMIDPSIADLYSPSEVLRCIQVGLLCVQERAEDRPTMPTVVLMLSSETVLMPQPKTPGFCVGRNPNETESSSSKQDQSYSVNEVTVTMLHAR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1251g0002 300 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 57 260 - -
Prci1251g0002 300 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Prci1251g0002 300 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1251g0002 300 Gene3D Transferase(Phosphotransferase) domain 1 57 260 - -
Prci1251g0002 300 Pfam Domain of unknown function (DUF3403) 254 300 IPR021820 GO:0004674
Prci1251g0002 300 MobiDBLite consensus disorder prediction 263 288 - -
Prci1251g0002 300 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 299 - -
Prci1251g0002 300 MobiDBLite consensus disorder prediction 271 288 - -
Prci1251g0002 300 Pfam Protein tyrosine and serine/threonine kinase 4 250 IPR001245 GO:0004672|GO:0006468
Prci1251g0002 300 SMART serkin_6 2 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1251g0002 300 SUPERFAMILY Protein kinase-like (PK-like) 3 279 IPR011009 -
Prci1251g0002 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
Prci1251g0002 300 PIRSF TyrPK_CSF1-R 3 70 - -
Prci1251g0002 300 PIRSF TyrPK_CSF1-R 58 298 - -
Prci1251g0002 300 FunFam Uncharacterized protein 1 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1251g0002 3 300 Receptor kinase-like Gene Family AT4G11530 56.393 2.14e-123 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci1251g0002 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1251g0002 - - aprc:113860154 499.975