Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1251g0001 ATGGGAGGTGTCACTAACCTCCTCCTCCAATATCATTTCTGGTTCTTCTTCATCACTTTCCTCTCTTGCTTCCCTGCAATTTCATTCTCTTCATCAGATACCTTGAGCTCAACCCAATCTCTCAAAACCAACGAGACGCTTCTGTCATCCAAACAGGCTTTCGTTCTGGGTTTCTTCTCTTCAGATGATTCAAAATACTACCTGGGAATATGGTACAAGAACATTCCAGATCGTACACTGGTTTGGGTCGCAAATAGAGACAACCCACTTGAGGATTCTAATGGGATTCTCAAGATCGGAGGAGAAACAGGAAACAATATGCAGATTGTGGATCGAACCGGGAAACCCATATGGTCATCGAACCAAACCGCAGCGAAAAACCCGGTTCTTCAGATTCTCGATTCCGGGAATCTGATTATCAGAGAAGCCAACGATTCGAATTCTCTCTGGCAGAGCTTCGATTACCCCACAGACACGCTCTTACCAGGCATGAAGCTTCTGTATAACTTCGACACAAAAATGGAGAAGCATATAACATCATGGACTTCAAGTGAAGATCCATCCACAGGTCTTATCTCCTTCAAGCTCGATTTCCATGGCCTCCCAGAGATTTTCCTGTGGAACAACCAGACAAAACTGTACAGAAGTGGACCTTGGAATGGGGTAAGATTCAGTGGGGTTCCAGAAATGAAATCTGACACAGACACAATCAAGTTCGACTTCTACGAGGATGAACACCAATTATACTACACATTCACCATCGGAAACGAATCGTTATTTTCAAGACTCATCGTAACACCTGATGGTCAGCTTCAACGATTAACCTGGGTACCAGATAACCAAGTTTGGACCAAATTCTGGTATGCTCCGAAAGACCAATGCGATGACTACAAAGAATGTGGTCCCTATGGGTTATGTGACACGAATGCTTCACCAGTTTGTACATGTATGAAAGGGTTCAGTCCTAAGAACAAACAAGCATGGAATCTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACAGAATTAGATTGTGGGACTGATAAGTTCTTGAAGGTACAGAACGTGAAGTTGCCTGAAACAACCTCGGTGTTCGTGAACAGAAGCATGAACCTCGTAGATTGTGGAGGTTTGTGTCAGAAGAATTGTTCATGCACTGCTTATGCGAACATAGAGATCACCAATGGAGGAACTGGGTGCGTTATGTGGACTGATGAACTCGTAGATATGAGAGTTTATACTGATGGCGGCCAAGATCTGCATGTCAGATTAGCAGCTTCTGATGTAGGTGGATCTGAGAAGAACAATGTGGAAGCTAAGGCTATAGGCATTACAGTTTCCATAGCTGTTGTACTATTGGGATTACTCATTTATTTCATCTGGAAGAGAAGGAAATTGCGGAGAGTGTTGAAAGGGAGGACTGAATCTAGAGGTGGATTTAGTCAAGATTCTCTAATGAATGAGCCAGTGTTCACAAGCAATAGAGGTAAATCTGGTGAAAGTGAGATGGATGAACTAGAGTTGCCATTGTTTGATTTTAACACCATATCAACGGCTACAAACAACTTCTCCGAAGAAAACAAGCTTGGAGAAGGAGGCTTTGGCAGTGTTTACAAGGGTAGATTAATGGAAGGCCAAGAAATTGCTGTGAAAAGGTTATCAAGAAACTCTGGGCAAGGAACTGAACAATTTAAGAATGAGGTCAGGTTATTAGTGAGACTTCAGCATCGAAATCTTGTTCGGTTGTTTGGTTGCTGTGTTGAGATGGATGAGAAGATGCTAGTTTATGAGTACATGGAGAATAGAAGCCTTGATTCCATTTTGTTTGACAAAGCAAGAAGATCCATACTAAATTGGCAAAAGCGCTTCCACATTATATGTGGCATTGCAAGAGGACTTCTTTACTTGCATCAAGATTCTAGATTTAGGATCATCCATAGGGATCTTAAAGCCAGCAACGTCTTACTTGATGAAGAAATGAATCCAAAAATATCGGATTTTGGAATGGTTAGAATTTTTGGAACAAATCAAACAGAAGCAAATACAATAAGAGTTGTTGGAACATATGGTTACATGTCTCCAGAATACGCCATGGATGGACTCTTCTCAATAAAGTCTGATGTTTTCAGTTTTGGCGTTCTAGTACTTGAGATCATAACTGCCAGGAAGAACAGAGGGTTCTATTACTCAAACGACGAATTAAATCTTCTTGGACATGCATGGAATCAATGGAAAGAAGGAAAAGCACTTGAAATGATCGATCCATCGATCGCGGATTTATATTCGCCATCCGAAGTTCTTCGATGCATACAAGTCGGACTCCTATGTGTCCAAGAGCGTGCAGAAGATCGACCTACCATGCCCACCGTGGTATTGATGTTGAGTAGTGAAACTGTATTGATGCCACAACCTAAAACCCCTGGCTTTTGCGTAGGAAGAAACCCTAATGAAACAGAGTCTTCTTCAAGTAAACAAGACCAATCATACAGTGTGAATGAAGTCACAGTCACAATGCTACATGCTAGGTAG 2529 0.4203 MGGVTNLLLQYHFWFFFITFLSCFPAISFSSSDTLSSTQSLKTNETLLSSKQAFVLGFFSSDDSKYYLGIWYKNIPDRTLVWVANRDNPLEDSNGILKIGGETGNNMQIVDRTGKPIWSSNQTAAKNPVLQILDSGNLIIREANDSNSLWQSFDYPTDTLLPGMKLLYNFDTKMEKHITSWTSSEDPSTGLISFKLDFHGLPEIFLWNNQTKLYRSGPWNGVRFSGVPEMKSDTDTIKFDFYEDEHQLYYTFTIGNESLFSRLIVTPDGQLQRLTWVPDNQVWTKFWYAPKDQCDDYKECGPYGLCDTNASPVCTCMKGFSPKNKQAWNLRDGSDGCVRNTELDCGTDKFLKVQNVKLPETTSVFVNRSMNLVDCGGLCQKNCSCTAYANIEITNGGTGCVMWTDELVDMRVYTDGGQDLHVRLAASDVGGSEKNNVEAKAIGITVSIAVVLLGLLIYFIWKRRKLRRVLKGRTESRGGFSQDSLMNEPVFTSNRGKSGESEMDELELPLFDFNTISTATNNFSEENKLGEGGFGSVYKGRLMEGQEIAVKRLSRNSGQGTEQFKNEVRLLVRLQHRNLVRLFGCCVEMDEKMLVYEYMENRSLDSILFDKARRSILNWQKRFHIICGIARGLLYLHQDSRFRIIHRDLKASNVLLDEEMNPKISDFGMVRIFGTNQTEANTIRVVGTYGYMSPEYAMDGLFSIKSDVFSFGVLVLEIITARKNRGFYYSNDELNLLGHAWNQWKEGKALEMIDPSIADLYSPSEVLRCIQVGLLCVQERAEDRPTMPTVVLMLSSETVLMPQPKTPGFCVGRNPNETESSSSKQDQSYSVNEVTVTMLHAR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1251g0001 842 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Prci1251g0001 842 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Prci1251g0001 842 PIRSF SRK 5 842 IPR024171 GO:0004674
Prci1251g0001 842 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Prci1251g0001 842 Gene3D Phosphorylase Kinase; domain 1 488 598 - -
Prci1251g0001 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 187 IPR036426 -
Prci1251g0001 842 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 785 - -
Prci1251g0001 842 Gene3D - 27 153 IPR036426 -
Prci1251g0001 842 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Prci1251g0001 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 598 - -
Prci1251g0001 842 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Prci1251g0001 842 Pfam Protein tyrosine and serine/threonine kinase 526 792 IPR001245 GO:0004672|GO:0006468
Prci1251g0001 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 802 - -
Prci1251g0001 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Prci1251g0001 842 MobiDBLite consensus disorder prediction 813 830 - -
Prci1251g0001 842 SMART serkin_6 523 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1251g0001 842 Gene3D Transferase(Phosphotransferase) domain 1 599 801 - -
Prci1251g0001 842 CDD PAN_AP_plant 341 425 - -
Prci1251g0001 842 Pfam PAN-like domain 345 410 IPR003609 -
Prci1251g0001 842 Pfam D-mannose binding lectin 79 181 IPR001480 -
Prci1251g0001 842 CDD B_lectin 41 156 IPR001480 -
Prci1251g0001 842 Pfam Domain of unknown function (DUF3403) 796 842 IPR021820 GO:0004674
Prci1251g0001 842 Pfam Receptor serine/threonine kinase 481 513 IPR022126 GO:0004674
Prci1251g0001 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 153 - -
Prci1251g0001 842 CDD STKc_IRAK 529 794 - -
Prci1251g0001 842 SMART blect_4 38 156 IPR001480 -
Prci1251g0001 842 MobiDBLite consensus disorder prediction 805 830 - -
Prci1251g0001 842 SMART ntp_6 345 424 IPR003609 -
Prci1251g0001 842 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1251g0001 500 838 Receptor kinase-like Gene Family AT4G23150 56.637 1.26e-130 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci1251g0001 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1251g0001 - - gmx:106799702 1194.49