Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci123g0005 ATGGAATCATTAGACAAGCACAGAAGAGAGTTTTCCGGCGGCGACGAGGCGTCGCCAAGAGGAATTCTGGAAATCCCTGTTTCGGGGACAGAGTCAGATCACAGCGGAAGCAGCAACTGCAGCTTAAGCTCGCCGGAGAAGTCATCGGAGGCGGAGAGAGGGAGGGTGAGGGAAGGGGTGGGACATGGACAGCCATGGAAGGCGATAATAGAGTCATTGAAGAAGAAGTCGGTGCAGAGAATATCGGCGATTTCATTACTGGCGGCGAGCTACGAGATGTCAAGGAAGAGCTTGAGGAAGAGAAGGATGGAACGTATTCGAAGCGCAGAAGAAAGAATTAACGTGGGAGAGATCCCTACGAAAACTTCATGGAGGAACTTCGATTATGCAGGGCTCCAAGCTGCAACAGACGATTTCAATCCTGAGAACCTGATTGGGCAAGGTGGGCATGCTGAAGTCTACAAAGGACGCTTACCTGACGGTCAACTTGTGGCAGTGAAGAGGCTCATGAAGAAAGAGAAGCAAAATGAGGACAGAGCGGGTGATTACTTATCAGAGTTGGGAATTATTGCCCACATAAACCACCCAAATGCTGTGCGCTTGATTGGGTTCGGGGTCAACAATGGTTTCTACTTTGTCTTGCAATTAGCCTCAAATGGAAGCCTTTCTTCTCTGCTCTTTGGTTCTCCCTCAATCTCTTCCTTCTCCTACCTACAACTGCTTTTCCTGGGCTTGCGATACCTGCATCATGATTGTCAAAGACGAATCATACACAGAGACATCAAGGCCTCCAACATATTACTAAACGAAAATTACGAAGCTGAGATTTCAGACTTTGGACTCGCGAAATGGCTCCCAGAGAAGTGGACTCACCATGTCGTCTTCCCCATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAGAAGACTGATGTATTCGCCTTTGGAGTTTTGCTGCTGGAGCTCATTACAGGTCGTCGTGCAGTTGATTCATGCAGCAAGCAAAGTCTTGTCCTCTGGGCAAAACCACGACTAGAAGCACACAATGTGAAGGAATTAGTAGACCCTCGATTAGGAGAAGCTTATGATTCCATTGAATTGAAGCGGACCATGGTTACTGCTTCCATGTGTCTCCACCACTCATCCCCACACCGTCCGTACATGAAACAGGTTGTGCAGCTGCTGAAGGGCGAAGAGGGACTTGCTGATATGAAGCAGAAATCAGTATCAACAAGATCTCTCTTGCTAGATGCCAGTGACCTAGAAGAATATACTTGCTCAACTTACTTGAACGATCTTAATCGTTACAGGCAACTAGCGATGGAGTCAGCCAATGTCACTAGCCTCAGTCTCAGTTGA 1383 0.4758 MESLDKHRREFSGGDEASPRGILEIPVSGTESDHSGSSNCSLSSPEKSSEAERGRVREGVGHGQPWKAIIESLKKKSVQRISAISLLAASYEMSRKSLRKRRMERIRSAEERINVGEIPTKTSWRNFDYAGLQAATDDFNPENLIGQGGHAEVYKGRLPDGQLVAVKRLMKKEKQNEDRAGDYLSELGIIAHINHPNAVRLIGFGVNNGFYFVLQLASNGSLSSLLFGSPSISSFSYLQLLFLGLRYLHHDCQRRIIHRDIKASNILLNENYEAEISDFGLAKWLPEKWTHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSCSKQSLVLWAKPRLEAHNVKELVDPRLGEAYDSIELKRTMVTASMCLHHSSPHRPYMKQVVQLLKGEEGLADMKQKSVSTRSLLLDASDLEEYTCSTYLNDLNRYRQLAMESANVTSLSLS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci123g0005 460 MobiDBLite consensus disorder prediction 1 15 - -
Prci123g0005 460 Pfam Protein kinase domain 142 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci123g0005 460 SUPERFAMILY Protein kinase-like (PK-like) 120 403 IPR011009 -
Prci123g0005 460 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 116 216 - -
Prci123g0005 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Prci123g0005 460 MobiDBLite consensus disorder prediction 30 47 - -
Prci123g0005 460 MobiDBLite consensus disorder prediction 1 61 - -
Prci123g0005 460 Gene3D Phosphorylase Kinase; domain 1 110 214 - -
Prci123g0005 460 Gene3D Transferase(Phosphotransferase) domain 1 218 423 - -
Prci123g0005 460 SMART serkin_6 139 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci123g0005 460 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Prci123g0005 460 PANTHER OS08G0249100 PROTEIN 12 417 IPR046958 -
Prci123g0005 460 ProSiteProfiles Protein kinase domain profile. 139 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci123g0005 460 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 218 417 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci123g0005 126 449 Trihelix Transcription Factor Family AT1G70460 39.169 6.54e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci123g0005 Pkinase 2.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci123g0005 - - pcin:129295504 844.343