Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci123g0001 ATGGCCATTTCTACAGTGTATCTGGGAGGATATGACAAGGAAGATAAGGCCGCAAGAGCTTATGATTTGGCTGCTCTGAAGTACTGGGGTCCAACTGCTACCACCAACTTTCCTGTTTCGACTTACACAAAGGAATTGGAGGAGATGAAACATGTAACGAAGCAAGAATTCATTGCTTCACTGCGCAGGAAAAGTAGCGGTTTTTCTAGAGGAGCTTCTATATACAGAGGCGTAACAAGGCATCATCAGCAGGGTCGATGGCAAGCAAGAATCGGTCGTGTCGCGGGGAACAAAGATCTATACCTTGGAACATTTGCTACTGAGGAAGAAGCAGCTGAGGCATACGATATTGCAGCCATTAAATTCAGAGGTGCAGGTGCTGTGACGAACTTTGAGATGAACAGATACGATGTGGAAGCTATTATGAAGAGTACTCTTCCTGTTGGTGGATCAGCCAAACGTGCAAAACACTCCCCAGAATCAGAAGACAATGTTCTTCCTAGCAATAACCTCCATAACCTGCAACCTCAATATCCAAACGCGATCAATACCAACGGTGGAACTATCAGTTTCACTCCCATTCAACCTGCACTTGCTTCTATCCCCTGTGGCATTCCCTATGATTCCGCTGCAGCACATTACCACCACAACAATCTCTTGCACCATTTTTATCCTCCTAGCAGTTCTGGAACCGTCGATTCTGCTGTATCCGCAGCTGCGGCTGTTGTGGCTCCGATGACTTCGATGCCGGCTGCTGCTGAGTTTTTCCTGTGGCCTCATCAGCCTTGTTGA 792 0.471 MAISTVYLGGYDKEDKAARAYDLAALKYWGPTATTNFPVSTYTKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGAGAVTNFEMNRYDVEAIMKSTLPVGGSAKRAKHSPESEDNVLPSNNLHNLQPQYPNAINTNGGTISFTPIQPALASIPCGIPYDSAAAHYHHNNLLHHFYPPSSSGTVDSAVSAAAAVVAPMTSMPAAAEFFLWPHQPC 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci123g0001 263 SUPERFAMILY DNA-binding domain 73 133 IPR016177 GO:0003677
Prci123g0001 263 ProSiteProfiles AP2/ERF domain profile. 1 38 IPR001471 GO:0003700|GO:0006355
Prci123g0001 263 Pfam AP2 domain 74 124 IPR001471 GO:0003700|GO:0006355
Prci123g0001 263 SUPERFAMILY DNA-binding domain 5 40 IPR016177 GO:0003677
Prci123g0001 263 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Prci123g0001 263 FunFam AP2-like ethylene-responsive transcription factor 73 134 - -
Prci123g0001 263 CDD AP2 73 132 IPR001471 GO:0003700|GO:0006355
Prci123g0001 263 CDD AP2 6 40 IPR001471 GO:0003700|GO:0006355
Prci123g0001 263 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 167 - -
Prci123g0001 263 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Prci123g0001 263 Gene3D AP2/ERF domain 3 40 IPR036955 GO:0003700|GO:0006355
Prci123g0001 263 SMART rav1_2 1 44 IPR001471 GO:0003700|GO:0006355
Prci123g0001 263 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Prci123g0001 263 MobiDBLite consensus disorder prediction 149 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci123g0001 6 261 AP2-EREBP Transcription Factor Family AT5G65510 65.116 4.95e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci123g0001 AP2 8.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci123g0001 K09285 - gmx:100775390 347.436