Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1235g0002 ATGGAGACAAGTTCGTATGCAGCAGCGAAGCCCGCCAACTTGTGGGTCTTCACCCTCCCAGCCTTTCTTGGCTCCGAGCATCTTGTCGTCGACGCCTATGCTTTGCTGTCCATCTTTATCACCTTTCTCTCTATTGGCCTTCTCTCCTGGGCATTCTCTCACGGCGGCCACGCCTGGAAAAATGGCCGGAACTCTAGAGGACGAGTTCCTATCCCTGGTCCCCGTGGTCTTCCTGTGTTTGGGAGCTTATTCACCTTGAGCCGTGGCTTAGCTCACCGGTCCCTCGCCGCCATGGCTTGGGCTCGGGACAACACTCAGCTCATGGCTTTTAGCCTCGGCTTGGCTACTCCAGTTGTCGTGGCTTCTGATCCCACCACTGCCCGCGAAATTCTGACCTCGCCTCACTTCGCCGACCGCCCTCTCAAGCAGTCGGCGAAGAGTCTCATGTTTAGCCGGGCCATCGGCTTCGCTCCGAATGGAAGTTACTGGCGCCTTCTTAGGAGGATTGCTTCGACCCACTTGTTTGCACCACGGCGTATCGTAGCCCACGAAAAAGGACGCCAGCTTGAGTGCGCAGCCATGCTGTGCAACATAGCAACCGAACAGACGCAAAGGGGAACGGTTTCTCTTCGGAGACACCTCCAAGCTGCGTCTCTCAACAACATCATGGGCAGCGTCTTCGGCAAACGATATGATCCATCGATTGAGAGCGAAGACCTGAAACATCTCAAGGACATGGTTCGTGAAGGTTTTGAGCTTCTCGGTGCTTTCAACTGGTCTGATTACCTTCCATGGCTTAGCGCTATCTATGACCCACATCATATAAACGAACGCTGCTCGAAACTGGTTCCTCGTGTCAGGAAATTCGTCGGATCCATCATAGAAGAGCACCGAGCCGCCAAGTCTAGCAACCCCTCCGATAACGATGATTTCGTCGACGTTTTGCTCTCCCTAGAAGGAGAAGACAAGCTGGAGGAAAATGATATGATCGCTGTGTTGTGGGAAATGATATTCAGGGGGACAGATACGACGGCTCTTCTAACCGAGTGGGCAATGGCTGAGCTGGTGTTGCATCCGAAGGTCCAGGATAAGCTTTACGAGGAAATCTACCGGATTGTTGGGGACGATGGGGTCGTCACGGACGCCGACGTGGCGAGAATGCCGTACTTGCAAGCGGTGGTGAAAGAATCACTGCGAGTTCATCCACCTGGTCCACTCCTGTCGTGGGCCCGACTGTCCACGTCGGACGTCCACTTAAGCAACGGGATGGTGGTTCCCGCCAACACAACCGCCATGGTGAACATGTGGGCCATCACGCGCGACCCCCGCTTATGGGACGCCCCGCTGGAATTCTCGCCGGAGAGGTTTCTCGAGAGCGAAGGTGGCGCTGACGTGGACGTCAGGGGTTTGGATCTGCGGCTCGCACCGTTCGGGGCGGGACGGAGGGTGTGCCCCGGGAAGAACCTCGGGCTCGTGACGGTGTCGCTGTGGGTGGCGAGGCTGGTTCACCGTTTCAAATGGGTCCAGGATCGCCGACCCGTTGATCTCGCCGAGGTTCTAAAACTGTCCTGCGAAATGAAGCACCCACTGCATGCGGTAGTTGCGGAAAGAAGGGTTGGTTGA 1623 0.5619 METSSYAAAKPANLWVFTLPAFLGSEHLVVDAYALLSIFITFLSIGLLSWAFSHGGHAWKNGRNSRGRVPIPGPRGLPVFGSLFTLSRGLAHRSLAAMAWARDNTQLMAFSLGLATPVVVASDPTTAREILTSPHFADRPLKQSAKSLMFSRAIGFAPNGSYWRLLRRIASTHLFAPRRIVAHEKGRQLECAAMLCNIATEQTQRGTVSLRRHLQAASLNNIMGSVFGKRYDPSIESEDLKHLKDMVREGFELLGAFNWSDYLPWLSAIYDPHHINERCSKLVPRVRKFVGSIIEEHRAAKSSNPSDNDDFVDVLLSLEGEDKLEENDMIAVLWEMIFRGTDTTALLTEWAMAELVLHPKVQDKLYEEIYRIVGDDGVVTDADVARMPYLQAVVKESLRVHPPGPLLSWARLSTSDVHLSNGMVVPANTTAMVNMWAITRDPRLWDAPLEFSPERFLESEGGADVDVRGLDLRLAPFGAGRRVCPGKNLGLVTVSLWVARLVHRFKWVQDPXRPVDLAEVLKLSCEMKHPLHAVVAERRVG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1235g0002 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Prci1235g0002 541 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 SUPERFAMILY Cytochrome P450 71 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 Pfam Cytochrome P450 72 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 Gene3D Cytochrome P450 61 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PANTHER CYTOCHROME P450 78A7-RELATED 11 538 - -
Prci1235g0002 541 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1235g0002 541 FunFam Cytochrome P450 78A5 63 538 - -
Prci1235g0002 541 CDD CYP78 104 531 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1235g0002 8 537 Cytochrome P450 AT5G09970 69.231 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1235g0002 K20619 - qsa:O6P43_023282 849.351