Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci121g0007 ATGCCATATAATTATAGCTTAATTCGTTGTCACCGCGTAAGTGAGGCAGGTGCGATACGGACGGAGGAAACAGAGTGTTGCAGAAGGAAGACGGTGATGAGAAACAAGGCGGAGAAGCGAAAGCAAGATGAATCGAGAAAGAAACCGTACAGAGGGATTAGGATGAGGAAGTGGGGCAAGTGGGTGGCGGAGATCAGAGAACCCAACAAGAGGTCGAGGCTATGGTTGGGTTCCTACACCACACCAGTGGCTGCCGCTCGCGCATACGACACCGCCGTTTTCTATCTCAGAGGCCCTTCTGCTCGCCTCAACTTCCCCGAATTGTTATCGCAAGACGACGACGACGACCACCGCCTCGACGTCCAGGGCCACATGTCCCCCGATTCCATACGCAAGAAGGCCACCGAAGTCGGAGCCAGAGTCGACGCTCTCCAAGCCGCTCTTGAACACACCAAATCCCATCTCCAAACCACCTCCGACAAACCCGACCTGAATGAGTTCCCCAGACCCGAAGATCTTGCAGTCGAGGATTACAATTAG 540 0.5407 MPYNYSLIRCHRVSEAGAIRTEETECCRRKTVMRNKAEKRKQDESRKKPYRGIRMRKWGKWVAEIREPNKRSRLWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLSQDDDDDHRLDVQGHMSPDSIRKKATEVGARVDALQAALEHTKSHLQTTSDKPDLNEFPRPEDLAVEDYN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci121g0007 179 CDD AP2 50 108 IPR001471 GO:0003700|GO:0006355
Prci121g0007 179 MobiDBLite consensus disorder prediction 151 179 - -
Prci121g0007 179 Gene3D AP2/ERF domain 48 107 IPR036955 GO:0003700|GO:0006355
Prci121g0007 179 MobiDBLite consensus disorder prediction 154 179 - -
Prci121g0007 179 FunFam Ethylene-responsive transcription factor 2 48 107 - -
Prci121g0007 179 Pfam AP2 domain 50 98 IPR001471 GO:0003700|GO:0006355
Prci121g0007 179 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Prci121g0007 179 PRINTS Ethylene responsive element binding protein signature 88 108 IPR001471 GO:0003700|GO:0006355
Prci121g0007 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 29 173 - -
Prci121g0007 179 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Prci121g0007 179 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
Prci121g0007 179 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci121g0007 46 173 AP2-EREBP Transcription Factor Family AT3G50260 59.420 5.86e-50 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci121g0007 AP2 5.7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci121g0007 K09286 - gmx:732579 208.764