Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci121g0003 ATGCAAGGGACAAGGGGTAGAATAGGTTCCTTGGCTGAAACCTTGGAATTTGATTGTGGATCTACTTCAAGTAATGCTACCGTGGATCAGCAGATTTGCTGGGATGGCACGAGGAACCCTTTAGAAAATCAAAGCCCTCAAATTATGCTTTCACCTGGTGATGTGAACCCATTGTATGCAAATTCAATTAACCATGAATGGAAGAGCGTCAATAATTGGAGAATTGGTGAGCCAGGTTCCAGTGATTCACATATTGAAATTAACAATGACGAGCAGAAAAGAGAACTTGGATGGTCATCTTCAACGAGTGCTGGTGCTGGATCAAGATTAGGGTGGCAGTTTGAATCAACCAATTTACCTTCATTGGACAATGTCAATACAAGTCCTACGTGTATGAACAACTCCAATCCTCATTCTGTATCACAGAATCTCAACCTAAATGCCAGTTTGGCAGATGCCGGCTTTAATATGGGGCAGCATCTTGAGCATCCTAGCTTGAACAAACCAAGTGGATCAGTAAATGAGCCTATCCCACCTACTGTTGGTCCTGCGCCCTTTGCTCATCCTTCTGGAAGTAACATGGTAGATAATAGTAGTGGTAGGCTGGGGTATTCTACTGATGCCCAGCGTGTATCCTGTAAAAGAAAGGCTGTTGAAGGATATGTTGGACAATCTTCAGAAGGTGAAAGTTCTAGCCGCAGCCAGTACACAGAAAACTGTGCTTGGCATACACTTCCTACTCAGAGTAATTCTTGGAGCAGTTTAAGCAGATCTGCTACATCAGCATTGATAAGTTCAAGACCTGGCCGGGATGTGGGTGATGAATCTTCAGAGAGCATTGATAATTTGAATGTTGCAAGAAGCTCAAATAGCTTCCTGAGGAATTCTCGCTTGAGGATAAATCCTTCAAATCAACAGGATTCCATTCCTTTTGTTGCATTCTCCAATGACAGTGTGACTAGACGTTCTACAATTCCTTCATGTTCTCCTATGACACAAAGTTTTTGTCCTGTTGATGGCTCTATGGATTTGAGGTCAGCGCCATCTGCAGATATCGTTCCACAAAGCCAGCCCTTTGGAACCAGTTCTCCTTTACGCAGGAATATGCCATCATTTAGATGGAGTGGAAGCTCTAACTCAAGAAACAGCCATTTGTCAAACTCAATGATTTGGCCAGACAGGGATACTCAACTATATGAAGAAGGAAGCTCAAGAAGCATGTCTAGAAGCATAAATGATCCAATGTTTGTTCCAGTGGCTGATTTAAGAAATTCGGTTCGGAGTCCAACCAATAGAGCTTCAAGTAGTGCAAATTTAAATATATCAGGAAATGTTACTTCCTCACCGCATACTGGATTGAGTTCAGCCTTCAATTTACCATCTATTCCATCCTGGGTTTCTCGTCCCAATCCTCTACATCATCCACGGAGGTTATCTGATTATGTTCATCGATCATTGTTGTCATCTGTTTCTGAGGCTGCTGGAGGTTTCAGCAATAGCAATTCTTTCTTGCGCTCTGCTCCTATCACTTTATCTGAAGCAAGGGCACCATCATCTCGAGCTGGAAGTCAAGGACGTCATCAATCGCACTCAATATCACCATGGGTGGAGAGGCGAGGTGATAGCAACTTCAGGCTTCCCTATTCATTGCAAACTCTGGCTGTTGCCAGTGAAGGAAGTGGTAGACTTGGATCTGAGCTCCGCAGTGTTCTGGGCCTCATGTGTAGGGGACAGAACATTCGGTTTGAGGATTTTATGATCTTTGACCATTCAGTATTTTCTGGAATGGCTGATATTCATGACCGACATAGGGACATGCGACTTGATGTTGATAACATGTCTTACGAGGAGTTATTGGCCCTGGAAGAACGGATTGGAAATGTGAGTACTGGATTGAGCGAGGAAACTGTATTGAAACTAATGAAACGGAGGAAGTATTCAGTTGAAGAAGGGTCTCAATGCGAGGCAGAACCCTGCTGTATTTGTCAGGAAGAGTTTGACAACGGGGATGATGTTGGAACGCTTGATTGTGGCCATGACTACCATACGAACTGCATCAAACAGTGGCTAATGCAGAAGAATCTGTGCCCCATTTGTAAGACAACAGGCTTGGCAACTTGA 2121 0.4366 MQGTRGRIGSLAETLEFDCGSTSSNATVDQQICWDGTRNPLENQSPQIMLSPGDVNPLYANSINHEWKSVNNWRIGEPGSSDSHIEINNDEQKRELGWSSSTSAGAGSRLGWQFESTNLPSLDNVNTSPTCMNNSNPHSVSQNLNLNASLADAGFNMGQHLEHPSLNKPSGSVNEPIPPTVGPAPFAHPSGSNMVDNSSGRLGYSTDAQRVSCKRKAVEGYVGQSSEGESSSRSQYTENCAWHTLPTQSNSWSSLSRSATSALISSRPGRDVGDESSESIDNLNVARSSNSFLRNSRLRINPSNQQDSIPFVAFSNDSVTRRSTIPSCSPMTQSFCPVDGSMDLRSAPSADIVPQSQPFGTSSPLRRNMPSFRWSGSSNSRNSHLSNSMIWPDRDTQLYEEGSSRSMSRSINDPMFVPVADLRNSVRSPTNRASSSANLNISGNVTSSPHTGLSSAFNLPSIPSWVSRPNPLHHPRRLSDYVHRSLLSSVSEAAGGFSNSNSFLRSAPITLSEARAPSSRAGSQGRHQSHSISPWVERRGDSNFRLPYSLQTLAVASEGSGRLGSELRSVLGLMCRGQNIRFEDFMIFDHSVFSGMADIHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETVLKLMKRRKYSVEEGSQCEAEPCCICQEEFDNGDDVGTLDCGHDYHTNCIKQWLMQKNLCPICKTTGLAT 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci121g0003 706 FunFam E3 ubiquitin-protein ligase MBR2 627 704 - -
Prci121g0003 706 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 167 704 IPR045191 GO:0061630
Prci121g0003 706 MobiDBLite consensus disorder prediction 514 534 - -
Prci121g0003 706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 622 703 IPR013083 -
Prci121g0003 706 SMART ring_2 659 699 IPR001841 -
Prci121g0003 706 MobiDBLite consensus disorder prediction 514 531 - -
Prci121g0003 706 MobiDBLite consensus disorder prediction 158 207 - -
Prci121g0003 706 ProSiteProfiles Zinc finger RING-type profile. 659 700 IPR001841 -
Prci121g0003 706 Pfam Ring finger domain 659 700 IPR001841 -
Prci121g0003 706 SUPERFAMILY RING/U-box 644 702 - -
Prci121g0003 706 MobiDBLite consensus disorder prediction 191 206 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci121g0003 1 706 C3H Transcription Factor Family AT2G15530 32.938 2.81e-81 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci121g0003 - - pcin:129295490 1391.33