Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci121g0001 ATGACCAACTATGCGTTTCTGAACGATCAGCTGTCTACTCACACCTCGATTTTTGGGTTGCGACTCTGGGTCGTGCTGGGCATATGCGTAGGAGCAGCCATAGTCCTTGTTCTGTTTCTCATATCTCTCTGGTTCACCAAGCGCAACAACCATGCTTCCAACCTCAACTCTTCACACAATCCCATCATTCCGAATGTCTCTAAGGAGATCCAGGAAATCAGGATTGATCCTTCGCGCGACCCGGCTCATGGAAGGTCCGACTCGTGTCTGGAAGCAGAGGCTGAGGTGGATAGGGCCCAGGCCGTGCTTGTTCAGCAGCAGGGCGATGATAGCCAGAGAATTCACATAGAGATTGGCAAAGATCACCGGATTTCGTATCCTGAGAAGGTTGGTGGCTCATCGCATGGAAGTGGTGAGCAGGGTTCGATTTCTGTGCCTGAGGTTTCGCATTTGGGGTGGGGCCACTGGTACACTCTCAGAGAGCTCGAGGTCTCTACCAATGGATTTGCGGATGAGAACGTCATAGGTGAAGGTGGCTACGGAATTGTTTATCGCGGTGTGTTGGAAGATGATACCAAAGTTGCGGTTAAAAATTTGCTCAACAACAGGGGACAAGCTGAGAAGGAATTTAAGGTAGAAGTTGAAGCAATTGGACGTGTTCGGCACAAAAATTTGGTGAGGTTACTTGGATATTGTGTTGAAGGAGCCCATCGGATGCTTGTGTACGAGTATGTTGGGCCTTCCAGCCCTCTTTCGTGGGAAATTCGCATGAATATAATACTTGGAACTGCAAAAGGGTTGACATACCTTCATGAGGGACTTGAACCTAAGGTGGTTCACCGTGATATCAAGTCAAGCAACATATTGCTTGATAAGCAATGGAATCCAAAAGTCTCTGATTTTGGCCTTGCAAAGCTCTTGGGATCAGAGAGAAGTTATGTGACAACCCGTGTGATGGGAACATTCGGGTATGTAGCTCCAGAATATGCAAGTACTGGCATGTTAAACGAAAGAAGTGATGTATACAGCTTCGGTGTTCTTCTCATGGAGATAATTTCTGGAAGAAACCCAGTAGATTACAGCAGGCCTCCTGGAGAGGTGAACCTTGTTGAGTGGCTGAAGTCCATGGTTGCTAACCGAAATGCAGAGGCAGTGCTCGATCCTAGGCTACCCGAGAAGCCTTCTTCTAGGGCACTGAAGCGTGCCTTATTAGTAGCCTTGAGATGTGTGGATCCAAATGCCCAGAAAAGACCAAAGATGGGGCATATTATACATATGCTTGAAGCTGATGAGTTCCCTTTTCGAGATGACCGAAGAACGGGAAGGGAAAATGGACGCTCCCAGCGGATGAGCACAAGAGATGAGTTGAAGGATAAGCGAGTATGTGAATCAGGTGACAGTAGTGGATATGAAAGCAGTGTCCAAACTAGCAAGTCTATGGGCAGAAACCAAGAAACCGAAGGCCAATAG 1470 0.4769 MTNYAFLNDQLSTHTSIFGLRLWVVLGICVGAAIVLVLFLISLWFTKRNNHASNLNSSHNPIIPNVSKEIQEIRIDPSRDPAHGRSDSCLEAEAEVDRAQAVLVQQQGDDSQRIHIEIGKDHRISYPEKVGGSSHGSGEQGSISVPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYRGVLEDDTKVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVGPSSPLSWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIISGRNPVDYSRPPGEVNLVEWLKSMVANRNAEAVLDPRLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEADEFPFRDDRRTGRENGRSQRMSTRDELKDKRVCESGDSSGYESSVQTSKSMGRNQETEGQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci121g0001 489 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Prci121g0001 489 FunFam Probable serine/threonine-protein kinase At1g01540 149 244 - -
Prci121g0001 489 PANTHER OS01G0323000 PROTEIN 3 454 - -
Prci121g0001 489 MobiDBLite consensus disorder prediction 435 465 - -
Prci121g0001 489 SMART serkin_6 169 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci121g0001 489 ProSiteProfiles Protein kinase domain profile. 169 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci121g0001 489 SUPERFAMILY Protein kinase-like (PK-like) 150 428 IPR011009 -
Prci121g0001 489 Gene3D Phosphorylase Kinase; domain 1 145 242 - -
Prci121g0001 489 CDD STKc_IRAK 175 428 - -
Prci121g0001 489 FunFam Putative receptor-like serine/threonine-protein kinase 234 442 - -
Prci121g0001 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Prci121g0001 489 Gene3D Transferase(Phosphotransferase) domain 1 243 442 - -
Prci121g0001 489 Pfam Protein kinase domain 170 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci121g0001 489 MobiDBLite consensus disorder prediction 435 489 - -
Prci121g0001 489 MobiDBLite consensus disorder prediction 466 489 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci121g0001 24 463 Trihelix Transcription Factor Family AT5G38560 36.105 2.08e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci121g0001 Pkinase 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci121g0001 - - qsa:O6P43_016049 796.578