Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1218g0001 ATGATCCACTTTATAAGTTCCTCTTCATCACATGTCTCCTCTTCCACAAGTTCTCCAAACAGTGAAGCAAATGCTTTACTGAAGTGGAAAGCCAGCCTTGACAACAAAAGCCAAGCTCTATTATCATCGTGGAATGGTAATACTAGTCATCTTTGCAATTGGGTTGGAATTACATGTGATGAGTTCAACTCCATTTCTAATATTTTTCTTCAAAATCATGGATTAAGAGAACTTGCTTACACAATGGAAGTGATAGAGAAATGTGACGTTTATAGCTTTGGAGTGTTAGCGCTGGAAATAATCATGGGAAAGCATCCAAGAGATATTATGATGTCTTTTTTCTCGACCACATCTTCTATGAGAGAGGCAACAGTAGAAGCCTATGATTTTCCTTTGAAGGACGTGTTAGACCAAAGGTTAATTTATCCTCAAGGTTCGGTGGCTGAGATGGTGATGCTGATTGCAAGAGTAGCTTTCACTTGCTTGAATGAAAATCCACAAATTCGCCCAACCATAGAGCAAGTGTGTAAGGAGCTTGCCACATCAGCATTGCCTAGTTTTGTTCCATTCCATAGTATCACATTTGGAGATCTCAACTGCAAAGAGTTTTGA 612 0.3922 MIHFISSSSSHVSSSTSSPNSEANALLKWKASLDNKSQALLSSWNGNTSHLCNWVGITCDEFNSISNIFLQNHGLRELAYTMEVIEKCDVYSFGVLALEIIMGKHPRDIMMSFFSTTSSMREATVEAYDFPLKDVLDQRLIYPQGSVAEMVMLIARVAFTCLNENPQIRPTIEQVCKELATSALPSFVPFHSITFGDLNCKEF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1218g0001 203 Pfam Leucine rich repeat N-terminal domain 19 60 IPR013210 -
Prci1218g0001 203 Gene3D Transferase(Phosphotransferase) domain 1 65 181 - -
Prci1218g0001 203 PANTHER LEUCINE RICH REPEAT KINASE 2 51 183 - -
Prci1218g0001 203 Pfam Protein tyrosine and serine/threonine kinase 79 179 IPR001245 GO:0004672|GO:0006468
Prci1218g0001 203 SUPERFAMILY Protein kinase-like (PK-like) 83 179 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1218g0001 77 189 Receptor kinase-like Gene Family AT5G49660 35.833 6.57e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci1218g0001 PK_Tyr_Ser-Thr 1.2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1218g0001 - - pcin:129299596 389.423