Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1217g0001 ATGATTACAAGAAGCTTTGCTGATGGCATAACGAAACCGAGTTTCCTACTAACACAGACAAAAATGCCAATTCTAACATTTTGCCATTCTAAGTTTAGTTCTTCATTAACTCTACAGTTGCCTTGTAACTGCATGAGAAGAATGGGTTTGATTACGCAATTTAAATGTTCTGTTGCTAATAGAACATTGACGTCTAGTTCTGTGGCTTCACCTACATCCAAACCAGGCTCCATTGGCTTGAACAGGAAACAAGGGCGTTCATCCTCATTATATAGTCGTCCTAGTTTATCAGAAATGAACAAAGAGAGGATGGCAAACCGTGAGAAGGTTTACGCATTCTTGCGGGGGATTGGTATTGTCCCTGATGAGCTTGATGGTCTGGAACTTCCTGTGACAGTTGAAGTCATGAGGGAACGAGTAGACTTTCTTCACAATTTAGGGCTTACAATTGAAGACATCAATAATTATCCATTAGTTCTTGGCTGCAGTGTCAAAAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAGGAAATCTACTTTCACACAATTCTTGCGGAGATATCCACAAGTTCTTCATGCTAGTGTTGTTGTTGACCTTGAACCAGTGGTTAAGTATCTTGAGGGGATCGATATCAAGCCCAATGATATTCCCCGGGTTCTCGAGACATATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGTATTGGTGTTGGAAGAAGAGAAATTGGAGGGGTTCTAACACGATACCCTGAGATTTTGGGAATGCGAGTTGGCCGAGTAATCAAGCCTTTTGTGGAGTACCTGGAAAGCTTGGGAATTCCAAGATTAGCCATTGCAAGAATAATAGAGAAACGACCTTATATTCTTGGCTTTGGATTGGCTGAGAAGGTGAAGCCAAATGTTGAAGCTCTTGAAGCGTTCAATATTAGAAGAGCATATCTGCCCTCTGTAATCGCACAGTTTCCTGATATCATGGGAATGGACTTGAAGCCAAGGCTAGAGAATCAAAGCAATTTACTCAAATCTTTACTTGATTTGGATTCTCAAGATTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTGATCAGCCTCAGTAGTTCACCTATGCTGAAGCATCTTACTTTACTCAAGGATTGTGGGTTTTCCTTGCAACAAATGAAGAAGATGATTGTTGGTTGCCCTCAACTTCTCGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGGGAGGCCTTTAGAAGACTTGGTTGCTTTCCCAGCCTTTTTTACATATGGTCTGGAGTCAACTGTAAAACCTAGGCATAAGATGGTTGCCAAGAAGGGAGTGAAGTGTTCCCTCGCATGGATGCTTTGTTGCTCAGATGACAAATTTGAGCAACGAATGGATTATGACACTATTGACATGGACGAAATGGAAACGGGACCATCATTTGACATGAATGCACTGATGGAACCAAGGAGTGATGAGTCAGCTTCTGATTACGATGACACTGATGATGATGATGATGAAGAATAG 1581 0.4124 MITRSFADGITKPSFLLTQTKMPILTFCHSKFSSSLTLQLPCNCMRRMGLITQFKCSVANRTLTSSSVASPTSKPGSIGLNRKQGRSSSLYSRPSLSEMNKERMANREKVYAFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVVDLEPVVKYLEGIDIKPNDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAIARIIEKRPYILGFGLAEKVKPNVEALEAFNIRRAYLPSVIAQFPDIMGMDLKPRLENQSNLLKSLLDLDSQDFGRVVEKMPQVISLSSSPMLKHLTLLKDCGFSLQQMKKMIVGCPQLLALNIDIMKLSFDYFQKEMGRPLEDLVAFPAFFTYGLESTVKPRHKMVAKKGVKCSLAWMLCCSDDKFEQRMDYDTIDMDEMETGPSFDMNALMEPRSDESASDYDDTDDDDDEE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1217g0001 526 MobiDBLite consensus disorder prediction 66 100 - -
Prci1217g0001 526 SMART mt_12 434 465 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 87 120 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 330 362 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 367 397 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 FunFam Transcription termination factor MTERF4, chloroplastic 274 488 - -
Prci1217g0001 526 PANTHER CGI-12 PROTEIN-RELATED 171 482 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 MobiDBLite consensus disorder prediction 494 526 - -
Prci1217g0001 526 FunFam Transcription termination factor mterf4, chloroplastic 136 273 - -
Prci1217g0001 526 Gene3D Transcription termination factor 3, mitochondrial 77 200 IPR038538 -
Prci1217g0001 526 Gene3D Transcription termination factor 3, mitochondrial 273 487 IPR038538 -
Prci1217g0001 526 Pfam mTERF 172 480 IPR003690 GO:0003690|GO:0006355
Prci1217g0001 526 MobiDBLite consensus disorder prediction 66 96 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci1217g0001 mTERF 4.3e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1217g0001 K15031 - qsa:O6P43_020032 774.237