Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1214g0002 ATGCAGAAAGTCATGGGAATGTCAAAGAGCTTCTTCTCTTTTCTCTCAGGTTATCTGGTTCTTGCAGTTATGGTTCAATCTCAGGATCAATCAGGATTCATAAGCATAGATTGTGGAGCACCTGCCAAGTCCACCTACATTGAGAAGACAACAGGCATACATTATATATCAGATGACAAGTTCATAAATTCTGGAGTAAGTAACTCCATAACCACTGAGTTCCAAAGAGTGTATCAACAGCATATTTGGAACCTGAGAAGCTTTCCTCAAGGAACAAGAAACTGTTACGAAATAAACATCACAAGAGGCTCTAAATATCTGATCAGGGCTACTTTTCTGTATGGGAATTATGATGGCCTGAATGAGTTACCAAGTTTTGATCTTCATCTTGGGCCTAACCTCTGGGAAACAGTCAAAATAACCAATGAATCTGTGCCAATATTTCCTGAGATCATACATGTTCCATTATTAGATTACATTCAAATCTGTCTTGTTGACACAGGCTCTGGAACCCCGTTTGTTTCTGCTCTAGAATTAAGGACCTTGATTTCTATGAATGGTGTTTATAATACTCAGTCTGGATCCTTGTCACTTTACTCGAGGTTCGATTTAGGCTCAACAAGCAACAGAACATACAGGTATAGTTATGATGCTTATGATCGCATATGGCAATATTTCTACCACAAGGACTGGAAGCCAATAAGCGCTTCAATTTCTGAAGATTCCTTAACTCAAAATTATTTCAAACCACCAGCTATTGTTATGAGTACTGCAGCCACACCAATAAATGAAAGTTCTCCAATGTTAGTGGATTGGGAGCCAGAAAATGCAACAGACCAATTCTATATTTACATGCATTATACAGAGCTTCAAGTATTAAAAAAGAATCAGACAAGATCATTCAACATTACCCTCAATGGAGAAATGTTTTTCCCCAAGGTTGTACCTAAGTATGGGGTCACAAACACAATGGCCAACGTTGAAGCTATTAGTGGAGAAAAAATTCAGTTTTTGCTTCAGAAGACGGAGGATTCAAACCTCCCGCCTATTCTCAGCGCTATTGAAATTTATAAAGTTCAAAAAATTTCCCAGACAGAAACAGATCAAGGAGATGTTGATGCAATCTCAACAATCAAGTATTCCTATGGGGTGACAAGAAATTGGCAAGGAGATCCATGTGGTCCATTGGCCTACATTTGGGAAGGTCTAAATTGTACTTATAATGGTCAGAATTCACCTAGAATCACAACCCTCAGGAATTTGTCTTCAAGTGGACTGGCAGGACAGATAGATCCCTCCATCTCAAAGTTCACCATGTTGGAGAAATTGGATTTATCAAACAATAGCTTAAATGGATCAGTGCCTAATTTTCTTTCTCAACTGCAAAACCTGAAGATCTTAAACCTGGAGAGCAACAACTTCACAGGTACAGTTCCCACTGATCTGATTGAGAATTCAAAGAAAGGTTCCCTGTTACTAAGTGTTGGACAAAATCCATATCTATGTGAATCTTCTTCGTGCAACAAGAAAAAGAACAATATTATTATTCCCATAGTAGTACCAGTTGGTGGAGTTCTGATCCTTCTGGTAGCCGCAGCAGCAATATTTTCTACAATTAAAAGGATAAAACGAAGAGGCTCAATTGAGACCTCACAGCAAGTTGAAAAATTTGAAGAACAGAATGATACATATCTGCAAGCCACCAAGAGACAATATCCATACCCTGATGTCCTCAAAATGACCAATGACTTCAGCACAATTCTAGGAAAAGGTGGGTTCGGCACAGTTTATTTGGGTTACATTGATGAAACTCCAGTTGCGGTTAAAATGCTCTCTCCATCATCAGTTCAAGGTTATCAGCAATTTCAAGCAGAGGTTAAACTTTTAATGAGAGTTCATCACAGAAATCTGACTTCCCTTATTGGGTATTGTAATGAAGAAACGAATAAGGGGCTCATATATGAGTACATGGCTAATGGGCAAGACAGAAAAACAAAGTTACTGAAATGGGAAGACAGACTTTGTATAGCACTGGATACAGCATCAGGGTTGGAGTATCTGCATAAGGGATGCAGGCCACCTATAATCCATAGAGATGTAAAATCTTCAAATATATTGCTGAATGAAAACTTCAGTGCAAAAATAGCTGACTTCGGTTTATCTAAAACTATCCCCACTGATAGTGGAACTCATGTGTCAACTGCTGTTGCTGGTACTCCTGGTTATCTCGACCCTGAGTATTATATAACAAACAGATTGACAGAGAAAAGTGATGTTTTTAGTTTTGGAGTGGTTCTGTTGGAGATAATCACAAGTTTACCTGCCATATCAAGAAACCACGAGAAGACTCACATAAGTGAATGGGTCAGCTCCATGGTTGATAAAGGGGATATAAAGGCCATTGTTGACTCAAGGCTAAGTGGAGACTTTGACAGTAACTCTGTTTGGAGAGCTGTGGAAATGGCAATGACTTGTGTGTCTCCAAACCCCAACAACAGGCCAACCATGAGTGAGGTGGTGAATGAGCTAAAGGAGTGTTTGGAAACTGAAGTAGCTAGAACCAAAAATAATGGTGCTCATACAGGAGATTCAGTTGAATTAGCATCCCTGAATATGACAAGTTCAGAATTCTCTCCCTTGGCCAGGTAG 2649 0.3922 MQKVMGMSKSFFSFLSGYLVLAVMVQSQDQSGFISIDCGAPAKSTYIEKTTGIHYISDDKFINSGVSNSITTEFQRVYQQHIWNLRSFPQGTRNCYEINITRGSKYLIRATFLYGNYDGLNELPSFDLHLGPNLWETVKITNESVPIFPEIIHVPLLDYIQICLVDTGSGTPFVSALELRTLISMNGVYNTQSGSLSLYSRFDLGSTSNRTYRYSYDAYDRIWQYFYHKDWKPISASISEDSLTQNYFKPPAIVMSTAATPINESSPMLVDWEPENATDQFYIYMHYTELQVLKKNQTRSFNITLNGEMFFPKVVPKYGVTNTMANVEAISGEKIQFLLQKTEDSNLPPILSAIEIYKVQKISQTETDQGDVDAISTIKYSYGVTRNWQGDPCGPLAYIWEGLNCTYNGQNSPRITTLRNLSSSGLAGQIDPSISKFTMLEKLDLSNNSLNGSVPNFLSQLQNLKILNLESNNFTGTVPTDLIENSKKGSLLLSVGQNPYLCESSSCNKKKNNIIIPIVVPVGGVLILLVAAAAIFSTIKRIKRRGSIETSQQVEKFEEQNDTYLQATKRQYPYPDVLKMTNDFSTILGKGGFGTVYLGYIDETPVAVKMLSPSSVQGYQQFQAEVKLLMRVHHRNLTSLIGYCNEETNKGLIYEYMANGQDRKTKLLKWEDRLCIALDTASGLEYLHKGCRPPIIHRDVKSSNILLNENFSAKIADFGLSKTIPTDSGTHVSTAVAGTPGYLDPEYYITNRLTEKSDVFSFGVVLLEIITSLPAISRNHEKTHISEWVSSMVDKGDIKAIVDSRLSGDFDSNSVWRAVEMAMTCVSPNPNNRPTMSEVVNELKECLETEVARTKNNGAHTGDSVELASLNMTSSEFSPLAR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1214g0002 882 Gene3D Phosphorylase Kinase; domain 1 564 652 - -
Prci1214g0002 882 SUPERFAMILY Protein kinase-like (PK-like) 562 843 IPR011009 -
Prci1214g0002 882 FunFam Leucine-rich repeat receptor-like protein kinase 556 656 - -
Prci1214g0002 882 Gene3D Transferase(Phosphotransferase) domain 1 653 867 - -
Prci1214g0002 882 FunFam Leucine-rich repeat receptor-like kinase 372 504 - -
Prci1214g0002 882 ProSiteProfiles Protein kinase domain profile. 582 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1214g0002 882 PANTHER OS07G0107800 PROTEIN-RELATED 34 847 - -
Prci1214g0002 882 ProSitePatterns Protein kinases ATP-binding region signature. 588 609 IPR017441 GO:0005524
Prci1214g0002 882 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 648 856 - -
Prci1214g0002 882 CDD STKc_IRAK 588 845 - -
Prci1214g0002 882 SUPERFAMILY L domain-like 375 485 - -
Prci1214g0002 882 SMART serkin_6 582 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1214g0002 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Prci1214g0002 882 Pfam Malectin-like domain 36 359 IPR024788 -
Prci1214g0002 882 Gene3D Ribonuclease Inhibitor 372 491 IPR032675 -
Prci1214g0002 882 Pfam Protein tyrosine and serine/threonine kinase 585 843 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1214g0002 5 882 Receptor kinase-like Gene Family AT1G51800 47.456 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci1214g0002 Malectin_like 5.9e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1214g0002 - - gmx:100785345 1093.95