Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1210g0004 ATGGCTAGCGAATCACTCTGCTTCGTCTTTCCCACACTAGTTCTGCTCATTCTCTCATCACCATTGTCGTCGGCTTCTTCTTCTGCAGTTACAGTGTCCATTGATGGCCGAGGAGATTACACCACAATCGGCCAAGCCATTGCAGAAGCTCCTTCGAACAGCGACAAAAAATACACCATCCTCGTTCGACCTGGAATCTACGAGGAGCGTCTCCACATTCCCCGCGACAAAACGAACATAGTTCTCATCGGCAACGGTCGCCATGATACTGTCATTCTCGGACACCACAATGGTGGCATGCTGTCTCAAACAGCCACAGTAGCAATTCAAGGAGCGGGCTTCGTGGGCCAGGGAATATCCTTCGTCAACTCAGCTGGGCCGAAAGCGGGCCCATGCCTAGCTTTCCTGAACACGGCGGACAGGAATGTCTACGGCTCCATCGACTTCGTCATGGGAAACGCCGCCGCCGCCTTCCAGAACTACGTGCTCTACACCCGCCTCGCCGGTTTCTCCGTCCTCACCGCGCAGTCTAGTGACGACCCCCTGGAACGCACCGGTTTCGTTTTCCAGTACTGTCGTTTCACGGCGTCTACAGAGGACTCCGAGAGGCAGTTATCCGGTGCGGGCAGGGCTATTTTAGGACGGCCGTGGAGGGCGTATTCGAGGTTGGTGATCATGCGGTCGTACATAGATGATATAGTGAGTCCGATGGGGTGGGGAGAGATGGAGGGGACGCCCACCGGTAAGGCGAGTTACATAGACTTCGAGAATTAA 774 0.5491 MASESLCFVFPTLVLLILSSPLSSASSSAVTVSIDGRGDYTTIGQAIAEAPSNSDKKYTILVRPGIYEERLHIPRDKTNIVLIGNGRHDTVILGHHNGGMLSQTATVAIQGAGFVGQGISFVNSAGPKAGPCLAFLNTADRNVYGSIDFVMGNAAAAFQNYVLYTRLAGFSVLTAQSSDDPLERTGFVFQYCRFTASTEDSERQLSGAGRAILGRPWRAYSRLVIMRSYIDDIVSPMGWGEMEGTPTGKASYIDFEN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1210g0004 257 Gene3D - 23 141 IPR012334 -
Prci1210g0004 257 Gene3D - 142 257 IPR012334 -
Prci1210g0004 257 SUPERFAMILY Pectin lyase-like 23 248 IPR011050 -
Prci1210g0004 257 PANTHER PECTINESTERASE 140 255 - -
Prci1210g0004 257 Pfam Pectinesterase 30 143 IPR000070 GO:0030599|GO:0042545
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1210g0004 16 244 Carbohydrate Esterase AT1G11580 35.115 3.00e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1210g0004 K01051 - mus:103977425 175.637