Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1209g0003 ATGGCTACGGGAGCTTATTTGCCAAATGAACTGCAAAGGGGTGAAAATAAGCCGAAGAATGTAGCAGCAGAAGGACGGAATCGACGTGTTCTCCAGGATATTGGGAATCTTGTGCAAGAAGCAGACAAGAACAAGAAACCAAGCTTTGCAACAACAAAAATATTAGCAGCAGGGAAGACTGTTCACCCAGAAGAACGTGAAGTTATTATAATTAGCTCTGATGAAGAAAGTGAGGAAGGAAAGGAGAAGGAGAAGAAGAAGGAACCAGGTAAAGCAAGGAATACAAGACAGCACTCAGCTAAGAAGAATGTGAAGACCCTCAGTGCAATCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACGTACTTACAAGCAAAAGGACCACGTGGTAGACGTTGATGCAGCCGACATTGACAATGAATTGGCAGCTGTTGAGTACATTGACGAACTCTACAAGTTCTACAAATTTGCAGAAGATGATAGCCGTGTGCATGATTACTTGGGATCGCAGCCTGATGTGAATGCCAAGATGAGAGCAATCCTTGTGGACTGGTTGATAGAAGTACATCGTAAATTTGAACTCATGCCTGAAACTCTTCATCTGACAATAAACATTGTGGATCGCTTCCTTTCCATGAAGGTTGTGTCCAGAAAGGAGCTTCAGCTGGTTGGCATCAGCTCCATGCTCTTAGCCTGCAAATATGAGGAGATTTGGGCTCCAGAGGTGAATGACTTTGTGTGCATATCAGACAACGCCTATAAAAGAGAACAGATTCTGGTGATGGAGAAGACAATCTTGAGGAAGCTGGAATGGTATTTAACTGTTCCTACACCATATGTCTTCCTTGTTCGTTATATCAAAGCCTCTTCTCCCACTGATAAGGAGATGGAGAACATGGCGCATTTCCTGGCAGAACTGAGCTTAATTCACTATGCCACAGTAATGTTGTATAGCCCTTCTGTTGTTGCTGCTTCTGCTGTGTATGCTGCTCGGTGCACACTTGATAGGAGCCCTTTCTGGACTGAGACTTTAAAACATTACACAGGCTTTTCTGAGGACCAACTAAGGGAATGTGCCAAGCTCATGGTGAGCTTTCACTCACTGGCTGGTGAAAGCAAGTTGAAAGCAGTGTACAAAAAATTCTGCAATCCAGATCGCTGTGCAGTTGCTCTTCTTCCCCCAGCAAGAAGCTTGTTAATTCCACATGAACAGATTTGA 1218 0.4425 MATGAYLPNELQRGENKPKNVAAEGRNRRVLQDIGNLVQEADKNKKPSFATTKILAAGKTVHPEEREVIIISSDEESEEGKEKEKKKEPGKARNTRQHSAKKNVKTLSAILSARSKAACGRTYKQKDHVVDVDAADIDNELAAVEYIDELYKFYKFAEDDSRVHDYLGSQPDVNAKMRAILVDWLIEVHRKFELMPETLHLTINIVDRFLSMKVVSRKELQLVGISSMLLACKYEEIWAPEVNDFVCISDNAYKREQILVMEKTILRKLEWYLTVPTPYVFLVRYIKASSPTDKEMENMAHFLAELSLIHYATVMLYSPSVVAASAVYAARCTLDRSPFWTETLKHYTGFSEDQLRECAKLMVSFHSLAGESKLKAVYKKFCNPDRCAVALLPPARSLLIPHEQI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1209g0003 405 SMART Cyclin_C_2 276 395 IPR004367 -
Prci1209g0003 405 FunFam G2/mitotic-specific cyclin-1 264 390 - -
Prci1209g0003 405 MobiDBLite consensus disorder prediction 1 27 - -
Prci1209g0003 405 Gene3D - 163 274 - -
Prci1209g0003 405 SUPERFAMILY Cyclin-like 138 273 IPR036915 -
Prci1209g0003 405 CDD CYCLIN_AtCycB-like_rpt1 126 271 - -
Prci1209g0003 405 SUPERFAMILY Cyclin-like 277 398 IPR036915 -
Prci1209g0003 405 MobiDBLite consensus disorder prediction 70 101 - -
Prci1209g0003 405 ProSitePatterns Cyclins signature. 178 209 IPR006671 -
Prci1209g0003 405 PANTHER CYCLINS 93 380 IPR039361 -
Prci1209g0003 405 Pfam Cyclin, N-terminal domain 161 273 IPR006671 -
Prci1209g0003 405 Gene3D - 150 390 - -
Prci1209g0003 405 Pfam Cyclin, C-terminal domain 276 394 IPR004367 -
Prci1209g0003 405 PIRSF Cyclin_A_B_D_E 39 405 IPR046965 GO:0016538|GO:0044772
Prci1209g0003 405 PIRSF Cyclin_A_B_D_E 7 57 IPR046965 GO:0016538|GO:0044772
Prci1209g0003 405 MobiDBLite consensus disorder prediction 70 95 - -
Prci1209g0003 405 SMART cyclin_7 280 364 IPR013763 -
Prci1209g0003 405 SMART cyclin_7 183 267 IPR013763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1209g0003 14 393 Core Cell Cycle Gene Families AT2G26760 56.510 3.60e-150 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1209g0003 K21777 - qsa:O6P43_014681 499.975