Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1202g0003 ATGGAAGAAACCGCAACCATATTGGCTGCACTCTCCGCCCTCCCTCCTCCTCACCTCTCCGATCTCATCCACTCCATCGCCTCCGTCGTCCACCACCACCACCTCCGCCTCGCCTCCATCCTCTCTTCCCAATCCCTCTTCTCCCTCGCTCTCCATTACCTCCACTCTCTCTCCCTTCCCCAAAAGTCCCTCCTCATTGGCCGCCACCTCCTCTCTTCCCTCCACATCCTCACGCGCCACCTCAAACCGCCGCCGCCTCCATTATCTGCCCTCACGAGACAGCGTGACCTCGACGCCGTTCTGCTGCTCCTCTTATTCTGCGATGCCCACCAGCACCACCCGCAAGCTCTCGAAACGCCAGTCTGCGATTGGCGCAGAAATCTGAGCAGGCTCTTCTCCGAAAAATTGTTGGGGATGTCTTCTACTTTTATCGGGGAATGCAGTGCCGCGATTCTGATTCCCTATATTGAGATGGTAATCCGGTGCCGGAGGCTGGTGGGTTCGATGGATTGCGGCGGAGGAAAGGGTGGCAGGGAAGTGGCGGCGTCGAGGGCGGCCGTGGTGGCGCTGCCGCGAGTGGAGGTTAGAGCGGGTGGAAGGGAGTGCGTGATTTGCAAAGAGGAGATGAGAGTGGGGAGGGATGTGTGCGAACTGCCATGTCAGCACGTGTTTCATTGGAACTGCATATTACCGTGGTTGAGTAAAAGGAATACGTGTCCTTGCTGCAGGTTCCGGCTACCGTCCGATGATGTTCTCGGAGAGATCCAACGGTTGTGGGAGGTCTTGGTCAAAACGTGTGGGGCAGAGTTGGGGGATTGA 819 0.5788 MEETATILAALSALPPPHLSDLIHSIASVVHHHHLRLASILSSQSLFSLALHYLHSLSLPQKSLLIGRHLLSSLHILTRHLKPPPPPLSALTRQRDLDAVLLLLLFCDAHQHHPQALETPVCDWRRNLSRLFSEKLLGMSSTFIGECSAAILIPYIEMVIRCRRLVGSMDCGGGKGGREVAASRAAVVALPRVEVRAGGRECVICKEEMRVGRDVCELPCQHVFHWNCILPWLSKRNTCPCCRFRLPSDDVLGEIQRLWEVLVKTCGAELGD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1202g0003 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 146 247 - -
Prci1202g0003 272 ProSiteProfiles Zinc finger RING-type profile. 202 243 IPR001841 -
Prci1202g0003 272 Pfam Ring finger domain 201 243 IPR001841 -
Prci1202g0003 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 249 IPR013083 -
Prci1202g0003 272 SMART ring_2 202 242 IPR001841 -
Prci1202g0003 272 SUPERFAMILY RING/U-box 198 248 - -
Prci1202g0003 272 CDD RING-H2_PA-TM-RING 201 243 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1202g0003 2 265 C3H Transcription Factor Family AT5G02750 49.275 1.59e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1202g0003 K11982 - qsa:O6P43_006733 322.783