Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2939 ATGCATTCCATTGAATCCATCCCAGAAAATGAGTACTTTAAAGCTGAAGCTCACTTGTACAGATACATTTATAGTCACATAAATGGCACAGTTCTCAAGTGTGCTGTTCAGCTGGATATCCCAGACATAATTCACAACCATGGCCAACCCATTACTATTCCTCAATTGATCTCCAAACTAGAAGTTCACCCAACCAAAACTGCCTGTGTGGAGAGGCTTGTTCGCTTCTTGGTGCACAATGGCTTCTTATTAGAAACCAAAGTGATCAATGAAGAAGAAGAAGAAAATGAGGCATACACTCTCACTCCTCCTTCTAAATTACTTGTCAAAGGCATGGAACCAAACCTAGCACCAATGGTAGGGTTGGTCGAGACTGGTTTCATGGCCGCGCTTGATTTTCTGGGAAGTTGGTTCAAAGGGAACAATAAGACAATAGCTGAGATTGCCTTTGGGGTAGGCATGTGGGAAATGCTTGAACATGATCCTTTGAGATTGAAGTCTTTCAATGAAGCCATGGCGAGTGATTCACAGATGATCACTATGGTTCTTAAAGACTTCAAATCAATCTTCAAAGGATTGGAATCCATAGTTGATGTAGGAGGCGGCACAGGCACCACATGTAGAATCATCTGTGAAGCATACCCTAATCTGAAATGCATAGTGTTTGATCTTTCACAATTTGATTACATCTTGAGTTTTGTTGGTGGCAGCATGTTTGAATCCATCCCTTTTGCTGATGTGGTTCTTTTAAAGTGGATATTACATAATTGGGATGATGAAAGTTCTATGAAGATATTGAACAATTGTAAGGAGGCAATCACAAAGAAAGGCAAAGGAGGGAAAGTTATAATCATTGATGCAGTGATAAAGGAGAAGGAAGATGACGATGGCATGACGCAAGTGAAACTCTTGTTTGACATTTCGATGATGAGTACTCTCAATGGGAAAGAAAGAACTGAGAAAGAATGGAAGAAGCTTCTAGAAGCTGCAGGCTTCAAACATTACAAGATTACTCCTCTTTTTGGTTTTAGGTCCATCATTGAAGCTTATCCTTAA 1056 0.4006 MHSIESIPENEYFKAEAHLYRYIYSHINGTVLKCAVQLDIPDIIHNHGQPITIPQLISKLEVHPTKTACVERLVRFLVHNGFLLETKVINEEEEENEAYTLTPPSKLLVKGMEPNLAPMVGLVETGFMAALDFLGSWFKGNNKTIAEIAFGVGMWEMLEHDPLRLKSFNEAMASDSQMITMVLKDFKSIFKGLESIVDVGGGTGTTCRIICEAYPNLKCIVFDLSQFDYILSFVGGSMFESIPFADVVLLKWILHNWDDESSMKILNNCKEAITKKGKGGKVIIIDAVIKEKEDDDGMTQVKLLFDISMMSTLNGKERTEKEWKKLLEAAGFKHYKITPLFGFRSIIEAYP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2939 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 350 IPR029063 -
Prci11g2939 351 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Prci11g2939 351 PANTHER O-METHYLTRANSFERASE 29 336 IPR016461 GO:0008168
Prci11g2939 351 FunFam O-methyltransferase ZRP4 110 351 - -
Prci11g2939 351 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Prci11g2939 351 PIRSF O-mtase 1 351 IPR016461 GO:0008168
Prci11g2939 351 FunFam Coniferyl alcohol 9-O-methyltransferase 2 108 - -
Prci11g2939 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 351 IPR016461 GO:0008168
Prci11g2939 351 Pfam O-methyltransferase domain 140 333 IPR001077 GO:0008171
Prci11g2939 351 Gene3D Vaccinia Virus protein VP39 115 351 IPR029063 -
Prci11g2939 351 Gene3D - 2 108 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2939 Prci-Chr11 46003253 46005079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2939 31 337 Monolignol Biosynthesis Gene Families AT5G54160 32.609 3.54e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2939 K22588 K13262 qsu:111988269 360.918