Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2904 ATGAAAGAAGATGAATCTCTTCAACTCTTTTCTAACAAAGCATTCGACAAAAATCACCCTGAAGATGATTATTTGGAGCTGTCAAAATTTGTGGTTGAATACACAGGAGGTCTTCCCTTGGCACTTGATATTTTGGGTACTTTTCTTTATAGAAGAAGTATGGCCGAGTGGACAGATGCTTTGGATAGGTTGAAGCAAAATCCAGATGATAAAATTCTTCAGGTGCTTGAAATAAGTTATGATGGGTTAAATGAGGAAGAAAAGACAGTATTTCTAGATATTGCTTGTTTTTTCAGAGGATGGAAGAAAGATGAAGTAACCCAAATTTTGGAAAGTTGTGATCTTCACCCAACAATAGGAATAAAAGTTTTGATTGAAAAAACTTTACTTGTTGAAATGGAAGATCATCTTGGAGGCTGCATTTTAGAGATGCATGATTTACTTCAACAATTGGGTAGGCATATTATTGGTCGAGAATCTAACAATGTTCACGAGCGTAGCAGGTTGTGGTTGTCAGAGGACATCGAGCAAGGATCACAAGAAATAAAAGCTATTGTTCCGGTTGGAACTCAATATCCAGTTGAAGTACATAAAGAAGCCTTTTCAAAAGATCTCCCGCTTGAAACTCCATCATTGGATAAACTAGTTGCTATTAAAATGACTCATAGCAAAATAAAGCGACTTTGGAATGGAGTACTGTCTATGAAAAAGTTGAAGCATATTGATCTATCCCATTCTCGTGATTTGAATGAAACACCAGACTTCTCAGGAGCTCCAAATTTAGAATATTTAATCCTTGTTAGGTGCTCATCCCTTGTAAGGGTTCATCCCTCACTTGGAGAGTTAAAAAAGCTTGTTCGTGTGAACTTGAGTGATTGCTATCGTCTACAATATCTACCAAGAAAGCTGAAAGCAGAATCTTTGATAGAGTTAAATCTTAGTTGGTGCTTTGAAGTTGCAGTGCTCCCAGAGTTTGGGAAAGGAATGAAAAGTTTATCCTTGCTTGATGCAAGCAGTGCTTCTGTAACTAGACTTCCTGAATCATTTAGACACCTAACTGGTCTTAAAGAGTTGAATTTGAGTCATTGCAACTTTCGTGATGAATCAATCTTTGATCATTTTGGAAATTTATCATCACTAGTTATATTGGATTTAGGAGGAAACAGTGCTTTTGTTTAA 1179 0.3639 MKEDESLQLFSNKAFDKNHPEDDYLELSKFVVEYTGGLPLALDILGTFLYRRSMAEWTDALDRLKQNPDDKILQVLEISYDGLNEEEKTVFLDIACFFRGWKKDEVTQILESCDLHPTIGIKVLIEKTLLVEMEDHLGGCILEMHDLLQQLGRHIIGRESNNVHERSRLWLSEDIEQGSQEIKAIVPVGTQYPVEVHKEAFSKDLPLETPSLDKLVAIKMTHSKIKRLWNGVLSMKKLKHIDLSHSRDLNETPDFSGAPNLEYLILVRCSSLVRVHPSLGELKKLVRVNLSDCYRLQYLPRKLKAESLIELNLSWCFEVAVLPEFGKGMKSLSLLDASSASVTRLPESFRHLTGLKELNLSHCNFRDESIFDHFGNLSSLVILDLGGNSAFV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2904 392 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 84 - -
Prci11g2904 392 Pfam NB-ARC domain 2 69 IPR002182 GO:0043531
Prci11g2904 392 PRINTS Disease resistance protein signature 233 249 - -
Prci11g2904 392 PRINTS Disease resistance protein signature 35 49 - -
Prci11g2904 392 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 368 IPR044974 GO:0006952
Prci11g2904 392 SUPERFAMILY L domain-like 144 388 - -
Prci11g2904 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 94 IPR027417 -
Prci11g2904 392 Gene3D Ribonuclease Inhibitor 190 391 IPR032675 -
Prci11g2904 392 Gene3D - 1 84 IPR042197 -
Prci11g2904 392 Pfam Leucine Rich Repeat 355 375 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2904 Prci-Chr11 45682408 45683939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2904 249 385 WRKY Transcription Factor Family AT5G45050 32.394 1.12e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2904 - - pcin:129286562 776.933