Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2900 ATGCAAATTCTACCTGGTGTTTGGATGAACTTCATGAGATTATTAAATGTAAAAACAGTCTGGGCCGACAAGTATTTCCCATTTTTTATAGTGTTGATCCATCTGATGTCAGATATCAAAAGGCAAGTTATGGTAAAGCTTCAGCCAAACATGAAGAGAGATTCAAAGAAAGCGAAGACAACGTTCAGAGATGGAGAGATGCTTTGTTGCAAGTTAGCAACTTGTCAGGGTGGGATACCAGGGGCCGGAGGTCTTCCTTTGGCACTTCATGTTTTAGGTACTTTTTTGCGTGGAAGAAGTATGCCTGAGTGGAAAGATGCCTTAGACAAGCTAAAGAAAATTCCAGATGATAATATTCTTCAGATACTCAAAATCAGCTATGATGGATTAAATGATGAAGAAAAGACCATATTTTTGGATATTGCTTGCTTCTTCAGAGAACAGAGGAAAGAAGAAGTAATCCAAATTTTGAAAAATTGTGATCTTTTTCCAACAATTGAGATAAATATTTTGATGGAGAAAGCTTTACTAGTTGAAAAGAAGGATTCGTGTGGAGAGTGTATATTAGAAATGCATGATTTACTTCAAGAATTGGGAAGGAACATAGTTTTTCAAGAATCTCCTAGTAATGTTGGGAGACGAAGTAGGTTGTGGAAATTAGAGGACATTCATGAAATTTTGAAAAATAATACGGGATCTGAAGCAATGCAAGCAATTGTTATGCGCCCAAACCTACATGAATTAGAATTTATGCAAAATTTGAAGTTCATTGATATGAGAGGTTCTGAAGATTTGGTTGAAACTCCGGATTTCTCAGGAGTCCCAAATTTAGAAAAATTGATTTTGGATGGATGCTCATCCTTGGTTGCCGTTCATCCTTCACTTGGAGAACTGAAAAAGGTTGTTGAAGTGAGTTTACGTTGGTGCACAAGTCTTGAAATCCTTCCAAGAAAATTGGAAATGAATTCTTTGATGAAGTTAAGTCTTTTCTTTTGCTGTAGAGTTTTTATGCTCCCCGAGTTTGTAGAAAATATGAAAAAATTATCATCCCTTAATTTAAGTCATACTGCTATAACCAATCTTCCTGAATCACTTGGATTCTTGATTGGTCTAAGAGATCTGAATTTGAGTGGATGCAATATTGCTGGTTGCTCAAAAGGATTTAAGCTGCCAAAAAATCTGAATGATCATGAGGCTTTGAGAGAACATGACATCTGTGAAGCTTGGAGTAACAAGAGGGAACTCAATGTGTCAACTTGGAGTAATTTACATCACATTTTTGAAGTTAATCTAACATCATTATCAGAGTTAGACTTGAGCTACTGTTGCATTAGTGATGACTCACTTCCAGATGATTTTGGCGGTTTACCATCATTAATTGCATTAGATTTGGGATATAATGATTTCGTTAATATGCCATCTGGTTGCTTCTCTAAACTTTTTCATCTGCACTATCTGTTTTTTTTAATTGCAAAAGGCTCAAGTCACTGCCAAATCTTCCACCACGGTTAA 1512 0.3598 MQILPGVWMNFMRLLNVKTVWADKYFPFFIVLIHLMSDIKRQVMVKLQPNMKRDSKKAKTTFRDGEMLCCKLATCQGGIPGAGGLPLALHVLGTFLRGRSMPEWKDALDKLKKIPDDNILQILKISYDGLNDEEKTIFLDIACFFREQRKEEVIQILKNCDLFPTIEINILMEKALLVEKKDSCGECILEMHDLLQELGRNIVFQESPSNVGRRSRLWKLEDIHEILKNNTGSEAMQAIVMRPNLHELEFMQNLKFIDMRGSEDLVETPDFSGVPNLEKLILDGCSSLVAVHPSLGELKKVVEVSLRWCTSLEILPRKLEMNSLMKLSLFFCCRVFMLPEFVENMKKLSSLNLSHTAITNLPESLGFLIGLRDLNLSGCNIAGCSKGFKLPKNLNDHEALREHDICEAWSNKRELNVSTWSNLHHIFEVNLTSLSELDLSYCCISDDSLPDDFGGLPSLIALDLGYNDFVNMPSGCFSKLFHLHYLFFLIAKGSSHCQIFHHG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2900 503 Gene3D Ribonuclease Inhibitor 344 499 IPR032675 -
Prci11g2900 503 PRINTS Disease resistance protein signature 429 445 - -
Prci11g2900 503 PRINTS Disease resistance protein signature 82 96 - -
Prci11g2900 503 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 82 324 IPR044974 GO:0006952
Prci11g2900 503 SUPERFAMILY L domain-like 191 488 - -
Prci11g2900 503 Gene3D Ribonuclease Inhibitor 189 343 IPR032675 -
Prci11g2900 503 SUPERFAMILY "Winged helix" DNA-binding domain 118 228 IPR036390 -
Prci11g2900 503 Gene3D - 81 131 IPR042197 -
Prci11g2900 503 ProSitePatterns Zinc finger C2H2 type domain signature. 379 403 IPR013087 -
Prci11g2900 503 SMART LRR_typ_2 345 368 IPR003591 -
Prci11g2900 503 SMART LRR_typ_2 431 455 IPR003591 -
Prci11g2900 503 SMART LRR_typ_2 456 479 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2900 Prci-Chr11 45640246 45644143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2900 265 379 WRKY Transcription Factor Family AT5G45050 30.435 4.35e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2900 - - pcin:129285347 525.398