Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2898 ATGGCCTCTTCATCCCAGACAGAGCTTCCTCTTAACGAGGACGACTCTCAAGACATGGTGATCTACCAAGTCCTCACTGAAGCCGACGCTCTTCCACGTCATCATCACCTTTCTGCACCAGTTATTGGCCTCCATCAGCCCATCAGCAGGACCGTCGCTGCCGTCGCCAAGAAGCACTACCGTGGTGTGAGGCGGCGGCCATGGGGCAAGTTCGCCGCTGAGATCCGAGACTCGGCTCGCCATGGGGCTCGCGTGTGGCTGGGGACGTTTGAGACTGCCGAAGAGGCTGCCTTGGCTTATGACAGAGCTGCTTTCAGAATGAGAGGTTCTAAGGCTCTCCTTAATTTCCCTCCTGACGTTGTAGCTCCTTCCTCTTCTTCTTCATCATCATCTTCTTCCTCTTCTCTTTTCTGCCCAGAGAAATTGAACAACAAGAGTTCTGATGATTCTGATTCAAAAGCTGTCTGA 468 0.5299 MASSSQTELPLNEDDSQDMVIYQVLTEADALPRHHHLSAPVIGLHQPISRTVAAVAKKHYRGVRRRPWGKFAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGSKALLNFPPDVVAPSSSSSSSSSSSSLFCPEKLNNKSSDDSDSKAV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2898 155 MobiDBLite consensus disorder prediction 120 155 - -
Prci11g2898 155 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Prci11g2898 155 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Prci11g2898 155 PANTHER DNA-BINDING DOMAIN 51 144 IPR044808 GO:0003700|GO:0009873
Prci11g2898 155 FunFam Ethylene-responsive transcription factor 2 58 118 - -
Prci11g2898 155 CDD AP2 58 119 IPR001471 GO:0003700|GO:0006355
Prci11g2898 155 Gene3D AP2/ERF domain 58 118 IPR036955 GO:0003700|GO:0006355
Prci11g2898 155 SMART rav1_2 59 123 IPR001471 GO:0003700|GO:0006355
Prci11g2898 155 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Prci11g2898 155 ProSiteProfiles AP2/ERF domain profile. 59 117 IPR001471 GO:0003700|GO:0006355
Prci11g2898 155 MobiDBLite consensus disorder prediction 120 143 - -
Prci11g2898 155 SUPERFAMILY DNA-binding domain 59 118 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2898 Prci-Chr11 45614128 45614998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2898 3 117 AP2-EREBP Transcription Factor Family AT4G17500 49.324 1.33e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci11g2898 AP2 7.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2898 K13433 - qsa:O6P43_012708 170.244