LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g2882	ATGGGCAAACGAAGTATAGTGATTCTTCTACTTTTGCTTATCTTCCAAGTTCTGCTCGTAGCAGCACAGAATGTACCAGCATCCAATCAAGACTTTACTGCTTTATTATCTCTCACTGAATTTTGGGAAAACAAGCCACCAAGTTGGGTGGGCACAGATCCTTGTGCTGCTAGTTGGGAAGGAATCGAATGCACCAATTCAAGAGTGACGTCAATAAAATTGTTAAGCATGAACATTAAGGGAAGCTTGACCGCAGATATTGGGACATTATCTGAATTAGAGACTCTGTCACTGGTTGGTTGTGATTTCTCTGGTCCTATTCCTGAATCAACAGGAGCTCTTAATCAGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTCAGTGGGAATATTCCACGTTCGTTTGGCAATCTATCCAATGTTAATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTATCTCTGATGAAGAAGGACCTGGTCTCGACATGCTACACAAAGCAGAGCACTTCCATTTTGGAAACAACCGCCTCTCAGGGCATGTTCAAGATAAGCTTTTCAGCTCAAATATGATACTGAAACACCTGCTTCTAGACAACAATAAGCTAAATGGAAGCATTCCAGACACTATGGGATCAGTGAAGACATTGATGGTGATACGCTATGATCACAATCAAATGAGTGGAGAAGTGCCAAGTATCAGCGATCTCACAAAACTCACTGATCTGAATTTAGGCAACAATAAGCTAACTGGCTCTTTGCCTGATCTTACTGGATTAAATGATCTCGCCTCTGTGGATTTGAGCAACAACTCTTTTAATTCTTCCGGTATACCTTCATGGGCTTCAAATTTGCCATATTTAACTACATTATCATTGGAAGACACAGGACTGCAAGGGGAAATACCTAACTCCTTATTTAAGCAGTCTAGCATAGAGGCTGTGAAAATGAAGAATAATCAGCTCAATGGTACCTTGGATGTTGGCAACTCCAGCCCCAATTTGGAGCTTATTGATTTGGAGAATAATATGATAACTGACTTTGCTCAGGAAAATCAACAAATCAATTTTGATATCATACTAGCTGGCAACTCCATTTGTCTGGAAACAGGAGCTGATTCAAAAAAATACTGCAGCAAGTCACAATCTACTAGCACATATTCAACACAACCAAATAGTTGTACAGCTCTTCCTTGTAGTTCTAACATGGTTTCCAGCCCAAAATGCATATGTGCAATTCCCTATACAGGAGTTCTGACTTCTAGAGCTGTCGGTTTCTCAAACATAAGAAACACAAGTTATTTTAAAGATCTTGAGAATGGCCTGTTGAGTACTTTCCAGTCCCTATACCTGCCAGTGGATTCAGTTTCTCTGAGCAACCCAGTCACCGACACTGCTACTAGTTATTTTAGCTTGGACCTACAAGTCTTCCCATCTCAAAGTGACCGTTTCAATAGAACTGGAGTTTCAAGCGTTTCTTTCGTGCTAGCCAACCAGATCTATAAACCTCCAGAATTTTTCAGCCCTTACTATTTTTCCAGTAATGATAGCTATGAATTCTACGCAGAAGAGCCTTCATCAAGCAAAACAAATACGGGGATTATAGCTGGTGCTGTAGCTTCTGGTGTTGTCGTTTTGGTACTATCCATCCTTGTAGTAATATTTGCAATCCGCCAGAAGAAAAGAGCAAAGGAATTTAATCCTTTCGCAAACTGGGAACAGAACAACAATAGTGGCAATGCTCCTCAGCTAAAGGGAGCACGTTGGTTTTCTTTTGAGGAGCTCAAGAAATACAGCAACAACTTTTGTGAAGCCAATACTATTGGAGCTGGGGGATATGGAAAGGTTTACCAAGCTGTTCTTCCCTCTGGTGAACTGGTTGCTGTCAAGCGTGCTTCACAAGAATCTATGCAGGGTGCTGTTGAGTTCAAAACTGAGATTGAACTTCTTTCAAGGGTTCATCACAAGAATCTTGTTGGTCTTGTGGGTTTCTGTTATGATAAAGGTGAACAAATGCTGGTATATGAGTATATTCCTAATGGCACTATCATGGACAGTCTTTCAGGAAAATCTGGAATTAGAATGAACTGGATAAGGAGACTAAAAGTTGCTGTAGGAGCAGCCAGAGGGCTAGCCTATCTTCATGAACTTGCTGATCCACCAATTATACACAGGGACATAAAATCAAGTAATATCCTGCTCGATGACCACCTAAACGCAAAAGTTGCTGATTTCGGTCTCTCCAAACTCAATGATAGTGACAGGGGCCATGTCACTACTCAAGTGAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTAACAGAAAAGAGCGATGTGTATAGTTTTGGAGTTACAATGCTTGAGCTCGTAACAGCAAGGAAGCCAATAGAGCAAGGAAAATTCATTGTGAGAGAGGTTCTAAGGGTATTGGATAGATCAAAAGAGTTTCACAACCTTCATGCCATTATTGATCCAACAATAAAGCACGAAGGAAACCCAAAAGGTCTAGAGAAGTTTGTGGACCTGGCATTGAAGTGTGTCAAAGATCATGCAGAAGAGAGACCTACAATGGCTGAAGTTGTGAAAGAGATTGAGAATATAATCCAACTTGCTGGTTTCAACCCCAATGCTGAATCAGCATCAACATCAGAAACTTATGACAATGTCAGTGGTGGGAAGATCTACCATCCTTATGTCGACGAAGATTTTGCCTACTCGAGCGTTTTTCCATCAGTAAAGGTAGAACCTCAGTAA	2781	0.4096	MGKRSIVILLLLLIFQVLLVAAQNVPASNQDFTALLSLTEFWENKPPSWVGTDPCAASWEGIECTNSRVTSIKLLSMNIKGSLTADIGTLSELETLSLVGCDFSGPIPESTGALNQLTFLALNLNRFSGNIPRSFGNLSNVNWLDIADNQIEGPIPISDEEGPGLDMLHKAEHFHFGNNRLSGHVQDKLFSSNMILKHLLLDNNKLNGSIPDTMGSVKTLMVIRYDHNQMSGEVPSISDLTKLTDLNLGNNKLTGSLPDLTGLNDLASVDLSNNSFNSSGIPSWASNLPYLTTLSLEDTGLQGEIPNSLFKQSSIEAVKMKNNQLNGTLDVGNSSPNLELIDLENNMITDFAQENQQINFDIILAGNSICLETGADSKKYCSKSQSTSTYSTQPNSCTALPCSSNMVSSPKCICAIPYTGVLTSRAVGFSNIRNTSYFKDLENGLLSTFQSLYLPVDSVSLSNPVTDTATSYFSLDLQVFPSQSDRFNRTGVSSVSFVLANQIYKPPEFFSPYYFSSNDSYEFYAEEPSSSKTNTGIIAGAVASGVVVLVLSILVVIFAIRQKKRAKEFNPFANWEQNNNSGNAPQLKGARWFSFEELKKYSNNFCEANTIGAGGYGKVYQAVLPSGELVAVKRASQESMQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYIPNGTIMDSLSGKSGIRMNWIRRLKVAVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVADFGLSKLNDSDRGHVTTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGVTMLELVTARKPIEQGKFIVREVLRVLDRSKEFHNLHAIIDPTIKHEGNPKGLEKFVDLALKCVKDHAEERPTMAEVVKEIENIIQLAGFNPNAESASTSETYDNVSGGKIYHPYVDEDFAYSSVFPSVKVEPQ	926

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g2882	926	SUPERFAMILY	L domain-like	53	353	-	-
	Prci11g2882	926	PANTHER	RECEPTOR-LIKE PROTEIN 55	40	876	-	-
	Prci11g2882	926	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	681	889	-	-
	Prci11g2882	926	CDD	STKc_IRAK	611	876	-	-
	Prci11g2882	926	SMART	serkin_6	605	879	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2882	926	Gene3D	Transferase(Phosphotransferase) domain 1	681	896	-	-
	Prci11g2882	926	SUPERFAMILY	Protein kinase-like (PK-like)	588	878	IPR011009	-
	Prci11g2882	926	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	725	737	IPR008271	GO:0004672\|GO:0006468
	Prci11g2882	926	ProSitePatterns	Protein kinases ATP-binding region signature.	611	633	IPR017441	GO:0005524
	Prci11g2882	926	Gene3D	Phosphorylase Kinase; domain 1	575	680	-	-
	Prci11g2882	926	FunFam	Leucine-rich repeat protein kinase family protein	572	680	-	-
	Prci11g2882	926	ProSiteProfiles	Protein kinase domain profile.	605	877	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2882	926	ProSiteProfiles	Leucine-rich repeat profile.	242	264	IPR001611	GO:0005515
	Prci11g2882	926	Gene3D	Ribonuclease Inhibitor	281	370	IPR032675	-
	Prci11g2882	926	Gene3D	Ribonuclease Inhibitor	28	280	IPR032675	-
	Prci11g2882	926	FunFam	Leucine-rich repeat protein kinase family protein	161	259	-	-
	Prci11g2882	926	Pfam	Leucine rich repeat N-terminal domain	29	64	IPR013210	-
	Prci11g2882	926	Pfam	Protein kinase domain	608	871	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2882	926	FunFam	Leucine-rich repeat receptor-like kinase	32	132	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g2882	Prci-Chr11	45304752	45312362	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g2882	8	926	Receptor kinase-like Gene Family	AT5G49760	50.472	0.0	905

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Prci11g2882		Pkinase	2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g2882	-		-	mtr:11440804	1101.66