Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2881 ATGGGCAAACGAAGTATAGTGATTCTTCTACTTTTGCTTATCTTCCAAGTTCTGCTCGTAGCAGCACAGAATGTACCAGCATCCAATCAAGACTTTACTGCTTTATTATCTCTCACTGAATTTTGGGAAAACAAGCCACCAAGTTGGGTGGGCACAGATCCTTGTGCTGCTAGTTGGGAAGGAATCGAATGCACCAATTCAAGAGTGACGTCAATAAAATTGTTAAGCATGAACATTAAGGGAAGCTTGACCGCAGATATTGGGACATTATCTGAATTAGAGACTCTGGATCTCTCCTACAACAAAGGCATGAGTGGAAGAATTCCAGATGAAATTGGGAATTTGAGAAAATTAAAAACCCTGTCACTGGTTGGTTGTGATTTCTCTGGTCCTATTCCTGAATCAACAGGAGCTCTTAATCAGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTCAGTGGGAATATTCCACGTTCGTTTGGCAATCTATCCAATGTTAATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTATCTCTGATGAAGAAGGACCTGGTCTCGACATGCTACACAAAGCAGAGCACTTCCATTTTGGAAACAACCGCCTCTCAGGGCATGTTCAAGATAAGCTTTTCAGCTCAAATATGATACTGAAACACCTGCTTCTAGACAACAATAAGCTAAATGGAAGCATTCCAGACACTATGGGATCAGTGAAGACATTGATGGTGATACGCTATGATCACAATCAAATGAGTGGAGAAGTGCCAAGTATCAGCGATCTCACAAAACTCACTGATCTGAATTTAGGCAACAATAAGCTAACTGGCTCTTTGCCTGATCTTACTGGATTAAATGATCTCGCCTCTGTGGATTTGAGCAACAACTCTTTTAATTCTTCCGGTATACCTTCATGGGCTTCAAATTTGCCATATTTAACTACATTATCATTGGAAGACACAGGACTGCAAGGGGAAATACCTAACTCCTTATTTAAGCAGTCTAGCATAGAGGCTGTGAAAATGAAGAATAATCAGCTCAATGGTACCTTGGATGTTGGCAACTCCAGCCCCAATTTGGAGCTTATTGATTTGGAGAATAATATGATAACTGACTTTGCTCAGGAAAATCAACAAATCAATTTTGATATCATACTAGCTGGCAACTCCATTTGTCTGGAAACAGGAGCTGATTCAAAAAAATACTGCAGCAAGTCACAATCTACTAGCACATATTCAACACAACCAAATAGTTGTACAGCTCTTCCTTGTAGTTCTAACATGGTTTCCAGCCCAAAATGCATATGTGCAATTCCCTATACAGGAGTTCTGACTTCTAGAGCTGTCGGTTTCTCAAACATAAGAAACACAAGTTATTTTAAAGATCTTGAGAATGGCCTGTTGAGTACTTTCCAGTCCCTATACCTGCCAGTGGATTCAGTTTCTCTGAGCAACCCAGTCACCGACACTGCTACTAGTTATTTTAGCTTGGACCTACAAGTCTTCCCATCTCAAAGTGACCGTTTCAATAGAACTGGAGTTTCAAGCGTTTCTTTCGTGCTAGCCAACCAGATCTATAAACCTCCAGAATTTTTCAGCCCTTACTATTTTTCCAGTAATGATAGCTATGAATTCTACGCAGAAGAGCCTTCATCAAGCAAAACAAATACGGGGATTATAGCTGGTGCTGTAGCTTCTGGTGTTGTCGTTTTGGTACTATCCATCCTTGTAGTAATATTTGCAATCCGCCAGAAGAAAAGAGCAAAGGAATTTAATCCTTTCGCAAACTGGGAACAGAACAACAATAGTGGCAATGCTCCTCAGCTAAAGGGAGCACGTTGGTTTTCTTTTGAGGAGCTCAAGAAATACAGCAACAACTTTTGTGAAGCCAATACTATTGGAGCTGGGGGATATGGAAAGGTTTACCAAGCTGTTCTTCCCTCTGGTGAACTGGTTGCTGTCAAGCGTGCTTCACAAGAATCTATGCAGGGTGCTGTTGAGTTCAAAACTGAGATTGAACTTCTTTCAAGGGTTCATCACAAGAATCTTGTTGGTCTTGTGGGTTTCTGTTATGATAAAGGTGAACAAATGCTGGTATATGAGTATATTCCTAATGGCACTATCATGGACAGTCTTTCAGGAAAATCTGGAATTAGAATGAACTGGATAAGGAGACTAAAAGTTGCTGTAGGAGCAGCCAGAGGGCTAGCCTATCTTCATGAACTTGCTGATCCACCAATTATACACAGGGACATAAAATCAAGTAATATCCTGCTCGATGACCACCTAAACGCAAAAGTTGCTGATTTCGGTCTCTCCAAACTCAATGATAGTGACAGGGGCCATGTCACTACTCAAGTGAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTAACAGAAAAGAGCGATGTGTATAGTTTTGGAGTTACAATGCTTGAGCTCGTAACAGCAAGGAAGCCAATAGAGCAAGGAAAATTCATTGTGAGAGAGGTTCTAAGGGTATTGGATAGATCAAAAGAGTTTCACAACCTTCATGCCATTATTGATCCAACAATAAAGCACGAAGGAAACCCAAAAGGTCTAGAGAAGTTTGTGGACCTGGCATTGAAGTGTGTCAAAGATCATGCAGAAGAGAGACCTACAATGGCTGAAGTTGTGAAAGAGATTGAGAATATAATCCAACTTGCTGGTTTCAACCCCAATGCTGAATCAGCATCAACATCAGAAACTTATGACAATGTCAGTGGTGGGAAGATCTACCATCCTTATGTCGACGAAGATTTTGCCTACTCGAGCGTTTTTCCATCAGTAAAGGTAGAACCTCAGTAA 2856 0.4086 MGKRSIVILLLLLIFQVLLVAAQNVPASNQDFTALLSLTEFWENKPPSWVGTDPCAASWEGIECTNSRVTSIKLLSMNIKGSLTADIGTLSELETLDLSYNKGMSGRIPDEIGNLRKLKTLSLVGCDFSGPIPESTGALNQLTFLALNLNRFSGNIPRSFGNLSNVNWLDIADNQIEGPIPISDEEGPGLDMLHKAEHFHFGNNRLSGHVQDKLFSSNMILKHLLLDNNKLNGSIPDTMGSVKTLMVIRYDHNQMSGEVPSISDLTKLTDLNLGNNKLTGSLPDLTGLNDLASVDLSNNSFNSSGIPSWASNLPYLTTLSLEDTGLQGEIPNSLFKQSSIEAVKMKNNQLNGTLDVGNSSPNLELIDLENNMITDFAQENQQINFDIILAGNSICLETGADSKKYCSKSQSTSTYSTQPNSCTALPCSSNMVSSPKCICAIPYTGVLTSRAVGFSNIRNTSYFKDLENGLLSTFQSLYLPVDSVSLSNPVTDTATSYFSLDLQVFPSQSDRFNRTGVSSVSFVLANQIYKPPEFFSPYYFSSNDSYEFYAEEPSSSKTNTGIIAGAVASGVVVLVLSILVVIFAIRQKKRAKEFNPFANWEQNNNSGNAPQLKGARWFSFEELKKYSNNFCEANTIGAGGYGKVYQAVLPSGELVAVKRASQESMQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYIPNGTIMDSLSGKSGIRMNWIRRLKVAVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVADFGLSKLNDSDRGHVTTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGVTMLELVTARKPIEQGKFIVREVLRVLDRSKEFHNLHAIIDPTIKHEGNPKGLEKFVDLALKCVKDHAEERPTMAEVVKEIENIIQLAGFNPNAESASTSETYDNVSGGKIYHPYVDEDFAYSSVFPSVKVEPQ 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2881 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Prci11g2881 951 Pfam Protein kinase domain 633 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2881 951 SUPERFAMILY Protein kinase-like (PK-like) 613 903 IPR011009 -
Prci11g2881 951 FunFam Leucine-rich repeat family protein 30 185 - -
Prci11g2881 951 CDD STKc_IRAK 636 901 - -
Prci11g2881 951 FunFam Leucine-rich repeat protein kinase family protein 186 284 - -
Prci11g2881 951 Gene3D Ribonuclease Inhibitor 190 448 IPR032675 -
Prci11g2881 951 ProSiteProfiles Leucine-rich repeat profile. 267 289 IPR001611 GO:0005515
Prci11g2881 951 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 706 914 - -
Prci11g2881 951 SUPERFAMILY L domain-like 53 378 - -
Prci11g2881 951 SMART serkin_6 630 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2881 951 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Prci11g2881 951 Gene3D Transferase(Phosphotransferase) domain 1 706 921 - -
Prci11g2881 951 ProSiteProfiles Protein kinase domain profile. 630 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2881 951 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Prci11g2881 951 Gene3D Phosphorylase Kinase; domain 1 600 705 - -
Prci11g2881 951 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Prci11g2881 951 PANTHER RECEPTOR-LIKE PROTEIN 55 40 901 - -
Prci11g2881 951 FunFam Leucine-rich repeat protein kinase family protein 597 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2881 Prci-Chr11 45304752 45312362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2881 8 951 Receptor kinase-like Gene Family AT5G49760 52.046 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci11g2881 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2881 - - gmx:100786172 1152.5