Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2874 ATGACAAAGGATAGAGAGAGGGGAAGTTATATCACATCAACTTTGTCAGATATCAAAAGGCAAGTTATGGTAAAGCTTCAGCCAAACATGAAGAGAGATTCAAAGAAAGCGAAGACAACGTTCAGAGATGGAGAGATGCTTTGTTGCAAGTTAGCAACTTGTCAGGGTGGGATACCAGGGGCCGGAGGTCTTCCTTTGGCACTTCATGTTTTAGGTACTTTTTTGCGTGGAAGAAGTATGCCTGAGTGGAAAGATGCCTTAGACAAGCTAAAGAAAATTCCAGATGATAATATTCTTCAGATACTCAAAATCAGCTATGATGGATTAAATGATGAAGAAAAGACCATATTTTTGGATATTGCTTGCTTCTTCAGAGAACAGAGGAAAGAAGAAGTAATCCAAATTTTGAAAAATTGTGATCTTTTTCCAACAATTGAGATAAATATTTTGATGGAGAAAGCTTTACTAGTTGAAAAGAAGGATTCGTGTGGAGAGTGTATATTAGAAATGCATGATTTACTTCAAGAATTGGGAAGGAACATAGTTTTTCAAGAATCTCCTAGTAATGTTGGGAGACGAAGTAGGTTGTGGAAATTAGAGGACATTCATGAAATTTTGAAAAATAATACGGGATCTGAAGCAATGCAAGCAATTGTTATGCGCCCAAACCTACATGAATTAGAAGTAAATCCTAAATCCTTTTCTAAGATGACTAATCTTAAATTACTCATCTTACCGTGGGAGGTGAAACTTTCGTATGATCTCAAATGTTTTCCTCGTGCAATAAAAGTTGTTCAATGGTATTCATTTCCTTTAGAAGCTCTTCCACTTCAAATTCCATTGGATAAACTTGTCGATATTAACATGCATCGTAGCAAAATAAAGCAACTACGGAATGGCTTACTGTTTATGCAAAATTTGAAGTTCATTGATATGAGAGGTTCTGAAGATTTGGTTGAAACTCCGGATTTCTCAGGAGTCCCAAATTTAGAAAAATTGATTTTGGATGGATGCTCATCCTTGGTTGCCGTTCATCCTTCACTTGGAGAACTGAAAAAGGTTGTTGAAGTGAGTTTACGTTGGTGCACAAGTCTTGAAATCCTTCCAAGAAAATTGGAAATGAATTCTTTGATGAAGTTAAGTCTTTTCTTTTGCTGTAGAGTTTTTATGCTCCCCGAGTTTGTAGAAAATATGAAAAAATTATCATCCCTTAATTTAAGTCATACTGCTATAACCAATCTTCCTGAATCACTTGGATTCTTGATTGGTCTAAGAGATCTGAATTTGAGTGGATGCAATATTGCTGGTTGCTCAAAAGGATTTAAGCTGCCAAAAAATCTGAATGATCATGAGGCTTTGAGAGAACATGACATCTGTGAAGCTTGGAGTAACAAGAGGGAACTCAATGTGTCAACTTGGAGTAATTTACATCACATTTTTGAAGTTAATCTAACATCATTATCAGAGTTAGACTTGAGCTACTGTTGCATTAGTGATGACTCACTTCCAGATGATTTTGGCGGTTTACCATCATTAATTGCATTAGATTTGGGATATAATGATTTCGTTAATATGCCATCTGGTTGCTTCTCTAAACTTTTTCATCTGCACTATCTGTTTTTTTTAATTGCAAAAGGCTCAAGTCACTGCCAAATCTTCCACCACGGTTAA 1671 0.3591 MTKDRERGSYITSTLSDIKRQVMVKLQPNMKRDSKKAKTTFRDGEMLCCKLATCQGGIPGAGGLPLALHVLGTFLRGRSMPEWKDALDKLKKIPDDNILQILKISYDGLNDEEKTIFLDIACFFREQRKEEVIQILKNCDLFPTIEINILMEKALLVEKKDSCGECILEMHDLLQELGRNIVFQESPSNVGRRSRLWKLEDIHEILKNNTGSEAMQAIVMRPNLHELEVNPKSFSKMTNLKLLILPWEVKLSYDLKCFPRAIKVVQWYSFPLEALPLQIPLDKLVDINMHRSKIKQLRNGLLFMQNLKFIDMRGSEDLVETPDFSGVPNLEKLILDGCSSLVAVHPSLGELKKVVEVSLRWCTSLEILPRKLEMNSLMKLSLFFCCRVFMLPEFVENMKKLSSLNLSHTAITNLPESLGFLIGLRDLNLSGCNIAGCSKGFKLPKNLNDHEALREHDICEAWSNKRELNVSTWSNLHHIFEVNLTSLSELDLSYCCISDDSLPDDFGGLPSLIALDLGYNDFVNMPSGCFSKLFHLHYLFFLIAKGSSHCQIFHHG 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2874 556 ProSitePatterns Zinc finger C2H2 type domain signature. 432 456 IPR013087 -
Prci11g2874 556 SUPERFAMILY L domain-like 170 541 - -
Prci11g2874 556 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 61 377 IPR044974 GO:0006952
Prci11g2874 556 Gene3D - 60 110 IPR042197 -
Prci11g2874 556 PRINTS Disease resistance protein signature 482 498 - -
Prci11g2874 556 PRINTS Disease resistance protein signature 61 75 - -
Prci11g2874 556 Gene3D Ribonuclease Inhibitor 179 396 IPR032675 -
Prci11g2874 556 SUPERFAMILY "Winged helix" DNA-binding domain 97 207 IPR036390 -
Prci11g2874 556 SMART LRR_typ_2 398 421 IPR003591 -
Prci11g2874 556 SMART LRR_typ_2 509 532 IPR003591 -
Prci11g2874 556 SMART LRR_typ_2 484 508 IPR003591 -
Prci11g2874 556 Gene3D Ribonuclease Inhibitor 397 553 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2874 Prci-Chr11 45235389 45239287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2874 61 548 WRKY Transcription Factor Family AT4G12020 28.827 5.79e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2874 - - pcin:129285347 1087.02