Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2860 ATGGATTCCATTGCAGCCATCCCAGAAAGTGAGTACTTTAAAGCTGAAGCTCACTTGTACAGATACATTTATAGCCACATTAATAGCACAGTTCTCAAGTGTGCTGTTCAGCTAGATATCCCAGACATAATCCACAGCCATGGCCAGCCCATCACTATTCCTCAATTGATCTCTAAATTAGAAGTTCACCCAACCAAAACTGGCTGTGTGGAGAGGCTTGTTCGCTTCTTGGTGCACAATGGCTTCTTATTAGAAACCAAAGTGAACAATGAAGAAGACGAGGAAAGTGAGGCATATACTCTCACTCCTTCTTCTAAACTACTCGTCAAAGCCATGGAACCAAACTTGGCACCAATAGTAAGGTTGGTCGAGACTGGTTACATGGCTACGTTTGATTTTCTAGGAAGCTGGTTCAAAGGGAACGATAAGACGATAGCTGAGATGGCCTTTGGGGTAAGCATGTGGGAAATGCTTGAACATGATCCTCTGAGATTGAAGTCTTTCAATGAAGCCATGGCTAGTGATTCACAGATGATCACCAAGGTACTTAAAGACTCTAAATCAGTCTTCAAAGGATTGGAATCCATAGTTGATGTAGGAGGCGGCACAGGCACCACATGCAGGATCATCTCTGAAGCATATCCTAATATGAAATGCATAGTGTTTGATCTTCCACAAGTTGTTGAAAACTGTTCAGGAAGCAAAAACTTAAGTTTTGTTGGTGGTAGCATGTTTAGATCCATCCCTTCTGCTGATGCTGTTCTTATAAAGTGGATATTACATAATTGGGATGATGAAAGTTCTTTGAAGATACTGAACAACTGTAAGGAGGCAATCACAAAGAAAGGAGAAGGAGGAAAAGTTATAATCATTGACGCAGTGATAAAGGAGAAGGACGATGACGATGGCATGATGCAAGTGAAACTCTTGTTTGACATTTTGATGATGAGTACTCTGAACGGGAAAGAAAGAACTGAGAAGGAATGGAAGAAGCTTCTAGAAGCTGCAGGCTTCAAACATTACAAGACTGCTCCTCTTTCTGGTTTTAGGTCCATCATTGAAGCTTATCCGTAA 1074 0.4134 MDSIAAIPESEYFKAEAHLYRYIYSHINSTVLKCAVQLDIPDIIHSHGQPITIPQLISKLEVHPTKTGCVERLVRFLVHNGFLLETKVNNEEDEESEAYTLTPSSKLLVKAMEPNLAPIVRLVETGYMATFDFLGSWFKGNDKTIAEMAFGVSMWEMLEHDPLRLKSFNEAMASDSQMITKVLKDSKSVFKGLESIVDVGGGTGTTCRIISEAYPNMKCIVFDLPQVVENCSGSKNLSFVGGSMFRSIPSADAVLIKWILHNWDDESSLKILNNCKEAITKKGEGGKVIIIDAVIKEKDDDDGMMQVKLLFDILMMSTLNGKERTEKEWKKLLEAAGFKHYKTAPLSGFRSIIEAYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2860 357 Gene3D - 4 108 IPR036388 -
Prci11g2860 357 FunFam O-methyltransferase ZRP4 110 357 - -
Prci11g2860 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Prci11g2860 357 Gene3D Vaccinia Virus protein VP39 113 357 IPR029063 -
Prci11g2860 357 Pfam O-methyltransferase domain 138 339 IPR001077 GO:0008171
Prci11g2860 357 FunFam Coniferyl alcohol 9-O-methyltransferase 3 108 - -
Prci11g2860 357 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Prci11g2860 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Prci11g2860 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Prci11g2860 357 PANTHER O-METHYLTRANSFERASE 19 342 IPR016461 GO:0008168
Prci11g2860 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2860 Prci-Chr11 45079782 45081690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2860 32 342 Monolignol Biosynthesis Gene Families AT5G54160 33.542 6.02e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2860 K22588 K13262 qsu:111988269 397.512