Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2859 ATGCATTCCATTGAATCCATCCCAGAAAGTGAGTACTTTAAAGCTGAAGCTCACTTGTACAGATACATTTATAGTCACATTAATGGCACAGTTCTCAAATGTGCTGTTCAGTTGGATAACCTAGACATAATCCACAACCATGGCCAACCCATTGCTATTCCTCAATTGATCTCCAAACTAGAAGTTCACCCAACCAAAACTGCCTGTGTGGAGAGGCTTGTTCGCTTCTTGGTGCACAATGGCTTCTTATTAGAAACCAAAGTGATCAATGAAGAAGAAGAAGAAAATGAGGCGTACACTCTTACTCCTTCTAAATTACTTGTCAAAGACTTTAAATCAATCTTCAAAGGATTGGAATCCATAGTTGATGTAGGAGGCGGCACAGGCACCACATGTAGAATCATCTCTGAAGCATACCCTAATCTGAAATGCATAGTGTTTGATCTTCCACAAGTTGTTGAAAACTGTTCAGGAAGCAACAACTTGAGTTTTGTTGGTGGCAGCATGTTTGAATCCATCCCTTTTGCTGGTGCGGTTCTTTTAAAGTGGATATTACATAATTGGGATGATGAAAGTTCTATGAAGATATTGAACAATTGTAAGGAGGCAATTACAAAGAAAGGCAAAGGAGGGAAAGTTATAATCATTGATGCAGTGATAAAGGAGAAGGAAGATGACGATAGCATGACGCAAGTGAAACTCTTGTTTGACATTTCGATGATGAGTACTCTCAATGGGAAAGAAAGAACTGAGAAAGAATGGAAGAAGCTTCGAAGCTGCAGCTTCAAACATTACAAGATTACTCCTCTTTTTGGTTTTAGGTCCATTATTGAAGCTTATCCTTAA 846 0.3877 MHSIESIPESEYFKAEAHLYRYIYSHINGTVLKCAVQLDNLDIIHNHGQPIAIPQLISKLEVHPTKTACVERLVRFLVHNGFLLETKVINEEEEENEAYTLTPSKLLVKDFKSIFKGLESIVDVGGGTGTTCRIISEAYPNLKCIVFDLPQVVENCSGSNNLSFVGGSMFESIPFAGAVLLKWILHNWDDESSMKILNNCKEAITKKGKGGKVIIIDAVIKEKEDDDSMTQVKLLFDISMMSTLNGKERTEKEWKKLLXSCSFKHYKITPLFGFRSIIEAYP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2859 282 Pfam O-methyltransferase domain 99 263 IPR001077 GO:0008171
Prci11g2859 282 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Prci11g2859 282 Gene3D - 2 107 IPR036388 -
Prci11g2859 282 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 282 IPR016461 GO:0008168
Prci11g2859 282 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Prci11g2859 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 281 IPR029063 -
Prci11g2859 282 PANTHER O-METHYLTRANSFERASE 29 109 IPR016461 GO:0008168
Prci11g2859 282 Gene3D Vaccinia Virus protein VP39 113 268 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2859 Prci-Chr11 45015056 45016898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2859 87 268 Monolignol Biosynthesis Gene Families AT5G54160 39.344 3.22e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2859 - K22588 gmx:100800912 267.7